Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0063 ATGAAGCTCATCTTTGGGATAATAGCTGTAGAAGGGAAGGGCAATCCAGGAAAGGTCGCCAAGATAACTAATTACGAGAAGGAATTGGAAGAAATGAAGCACATGACAAGACAAGAATTCGTGGCCGCCATAAGAAGGAAAAGTAGTGGGTTCTCTAGGGGTGCATCCATGTATCGCGGAGTCACAAGGCATCACCAACATGGGAGATGGCAAGCAAGGATTGGGAGAGTGGCAGGAAACAAAGATCTTTACTTGGGGACATTCAGTACTGAGGAAGAAGCAGCAGAGGCGTACGACGTAGCGGCCATAAAGTTCAGAGGCCTAACCGCAGTCACAAACTTCGACATGAATCGTTACGACGTCAAAGGCATTCTGGAAAGCAACAGTCTCCCCATCGGAGGCGGCGCCGCCAAACGGCTCAAGGAGGCTCAAGTTCTAGAATCTTCTAGAAAACGAGAACACATGCTGCCACATCATCTTCATCATGCCTCATCCCCCTCTGGCTCTACCTTACTACAACAACAACCTTATAGTTCCCTAATCCACACACCACTACTCCCCTTCATTGACCAAACAAGTGTCCAACAACCTCTCGACATTAATTCTCAGTATTCCTTTCTTCATCACACTTTCGATGCTTCTAATAATTACCAGCTTCATCTTCATCAGATTCAAAATCCTCCCTTTTACAACAGCGACGTCGTTCAGAGCACACATTACCACCCTCATCACCCTGCCTTGCTTATGAACATGGGATCTTCTTCGTCTTCATCATCATCGTCTGTGGTGGACAATAACAGTACTTCGGGGTTCGTGGGGAATGGAGGGATAGGGATCGGGATGGCTCTGAGTACAACGACGTCGTCGGCCGAGGAACTTGCGGTGGTTAAGGTTGATTATGACATGCCCTCCGATGCTTATAGTGGCGGCTGGTCGGCCCCACCGGACCTCACTCACCCGCCAAATGCTTCTGCTAATTTTACTACGTGGAATGGCTGA 999 0.4845 MKLIFGIIAVEGKGNPGKVAKITNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDVAAIKFRGLTAVTNFDMNRYDVKGILESNSLPIGGGAAKRLKEAQVLESSRKREHMLPHHLHHASSPSGSTLLQQQPYSSLIHTPLLPFIDQTSVQQPLDINSQYSFLHHTFDASNNYQLHLHQIQNPPFYNSDVVQSTHYHPHHPALLMNMGSSSSSSSSSVVDNNSTSGFVGNGGIGIGMALSTTTSSAEELAVVKVDYDMPSDAYSGGWSAPPDLTHPPNASANFTTWNG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0063 332 SUPERFAMILY DNA-binding domain 56 116 IPR016177 GO:0003677
Bisa12g0063 332 CDD AP2 56 115 IPR001471 GO:0003700|GO:0006355
Bisa12g0063 332 MobiDBLite consensus disorder prediction 311 332 - -
Bisa12g0063 332 ProSiteProfiles AP2/ERF domain profile. 57 115 IPR001471 GO:0003700|GO:0006355
Bisa12g0063 332 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 215 - -
Bisa12g0063 332 MobiDBLite consensus disorder prediction 151 171 - -
Bisa12g0063 332 Pfam AP2 domain 58 107 IPR001471 GO:0003700|GO:0006355
Bisa12g0063 332 SMART rav1_2 57 121 IPR001471 GO:0003700|GO:0006355
Bisa12g0063 332 Gene3D AP2/ERF domain 57 117 IPR036955 GO:0003700|GO:0006355
Bisa12g0063 332 FunFam AP2-like ethylene-responsive transcription factor 56 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0063 Bisa-ChrBisa12 1050128 1051893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0063 22 331 AP2-EREBP Transcription Factor Family AT3G20840 56.677 6.67e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa12g0063 AP2 9.5e-11 CL0081