Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0062 ATGGAATCAAAACCTCCACCGTCGCCGGAGCTTGACCTTGACAAGCTCAAAGCTCTCAAAGTCCTTGGTAAGGGAGGCATGGGCACTGTCTTCCTCGTCCACGACTGTGCGGCCGATCCCTCCGCTCTCCGCCCCTTCGCCCTCAAGGTTGTCGAAAAATCCTCCGTCCACAACAAGCTCGACGCCGTCCGTCGTGCCCGCTGGGAAATGCAGGTCCTCGGCCAATTGTCTCACCCGTTTCTTCCTTCTCTTTTAGGCACATTCGACTCCGATCAATTCCTCGCTTGGGCCATCCCTTACTGTCCCGGCGGCGACCTCAACGTCCTCCGTTACCTCCAAACTGATCGCGTCTTCTCCCCCGCCGTCATTCGATTCTATTTGGCCGAGATAGTCTGCGCTCTCGAGCACCTCCACAGCCTCGGCATCGCCTACCGCGATTTGAAGCCGGAGAATGTCCTTGTCCAGCAATCCGGCCACGTGATTCTCACGGACTTCGATCTCTCTCGTAAGCTCACCCCCAAAACCATCAAGACCGTCATCGATGCATCAACAGACGTCGAAGAAAATCTTCGGGACAATCGACGCAGGCACCGCCGGAATTTCTCGCGGTGGATCCTGGTCTCGCCGGACATTATGTTCATCACGAGAGGGTTGAACAAGGCGAAGTCCGCTCGAGTCAGCCCGGTGAGTCGACGCAAACTGAGTTTCTCAAATGGAGAGCGTTCTAACTCGTTCGTCGGCACGGAGGAGTACGTTTCGCCTGAGGTCGTGCGCGGGGAGGGACACGAGTTCGCCGTTGACTGGTGGGCCCTGGGGATATTAATCTATGAGATGCTGTACGGTACGACGCCGTTCAAGGGGAGGAACCGCAAAGAAACGTTTCGTAACGTTTTGGTGAAAGCACCAGAGTTCGTTGGGAAGCGGACGGAGTTAACGGACTTGATCGAACGCTTATTGCAAAAGGACCCCACGAGGCGGTTGGGCTACGCGCGTGGCGCCAGCGAGATCAAGGAGCATGAGTTCTTCAGAGGGGTCCGGTGGGACATCTTGACGGAGGTCGTACGGCCGCCGTTCATTCCGTCTAAAGAGGACGCCATCTTGACGTCGGAGCGACTGAGGACCGGTGGAAAGGACGTGAGGGAGTACTTCCAGAGGTTAAGCGCGCCGCCGTCCATCCCGCCATCTCCGTTATCGTCACCGTACCGGCCGAAATCCAGGGATATTACTATAACAGAATTCTGA 1242 0.5668 MESKPPPSPELDLDKLKALKVLGKGGMGTVFLVHDCAADPSALRPFALKVVEKSSVHNKLDAVRRARWEMQVLGQLSHPFLPSLLGTFDSDQFLAWAIPYCPGGDLNVLRYLQTDRVFSPAVIRFYLAEIVCALEHLHSLGIAYRDLKPENVLVQQSGHVILTDFDLSRKLTPKTIKTVIDASTDVEENLRDNRRRHRRNFSRWILVSPDIMFITRGLNKAKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGEGHEFAVDWWALGILIYEMLYGTTPFKGRNRKETFRNVLVKAPEFVGKRTELTDLIERLLQKDPTRRLGYARGASEIKEHEFFRGVRWDILTEVVRPPFIPSKEDAILTSERLRTGGKDVREYFQRLSAPPSIPPSPLSSPYRPKSRDITITEF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0062 413 ProSiteProfiles Protein kinase domain profile. 16 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0062 413 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Bisa12g0062 413 Gene3D Phosphorylase Kinase; domain 1 16 104 - -
Bisa12g0062 413 MobiDBLite consensus disorder prediction 387 413 - -
Bisa12g0062 413 FunFam Serine/threonine-protein kinase OXI1 105 173 - -
Bisa12g0062 413 PANTHER FLIPPASE KINASE 1-RELATED 11 363 - -
Bisa12g0062 413 SUPERFAMILY Protein kinase-like (PK-like) 14 392 IPR011009 -
Bisa12g0062 413 FunFam Serine/threonine-protein kinase UCNL 16 104 - -
Bisa12g0062 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Bisa12g0062 413 FunFam Serine/threonine-protein kinase OXI1 240 361 - -
Bisa12g0062 413 Gene3D Transferase(Phosphotransferase) domain 1 105 175 - -
Bisa12g0062 413 Gene3D Transferase(Phosphotransferase) domain 1 239 361 - -
Bisa12g0062 413 SMART serkin_6 16 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0062 413 Pfam Protein kinase domain 237 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0062 413 Pfam Protein kinase domain 18 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0062 Bisa-ChrBisa12 1010777 1012018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0062 11 400 AGC Kinase Gene Family AT3G20830 61.111 2.24e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa12g0062 Pkinase 4.6e-31 CL0016