Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0058 ATGGAGTCAGATCTCCAACCGCATCCCTCCATGTTTCACGAGCAGCAGCAGCAGATGAATTCGGGGCTCACACGGTACCGATCGGCGCCGAGCTCGTATTTCACGAATATAATAGACAGGGAGTTCTACGAGCACGTTTTCGATCGGCCTTCTAGCCCCGAGACAGAGCGTGTGTTTTCACGCTTACTCAATAGTTTCGGCGAGGACTCACCTACTCGAAATCAAAATCTCTCTTCTCTTGCCCTAAATCCTCCAGAAGTGAAGCAAGAAGCCATCCAGCAGCCTCAGGTTATACCATCCATGACTAATGAACCAGTGCTTCTACAGCAACAGCAACAGCAACAGCAGCAGCTGAATAATATGGATATGTACGACTCTGCTGCTTCTCGTAATATTTACCAAAGCTCAGCGAAACCTCCTTTGCCCAATCAGACTCCTTCCTCTGCTAATCGGTTGCCTCCTATGAAGACTGGACTTGGAAGTAACTCTAATCTGATCAGACATAGTAGCTCACCTGCAGGACTCTTTGCTAGCATCAACATTGATCCTGGCTATATTGCTGCTATGAGAGGCATGGGAACTTTTGGAGGCGGTAATACTGCTAGCGAAGAACCAAATTTTCCCGCTGCAGGGAGTTTGAAGAACCAACCAGGCTACTCTCCGGGGCTAATGTCATCCATAGAAGAAATTGGAGATAAAAACAACAGAGAGTTAGATAATCCACAGAATGAAGGTTTTGGGGAAGGGCAGGGTAGTGATTTTATGACAGGTTTCCCGGTAGATAATTGGGATGATTCTGCAATCATGTCTGACAATATTTCTGGTCTTAAAAGATACAGAGACGATGATGCAAAACCGTTTTCTGGTGTAAATGCAGCTGAAACCAAGAATGAGAGGGGAAGCCAGAGTCCTTCTCCTTTGGCTCATCACTTGAGTTTGCCAAAAACTGCAGCGGAGATGGCAGCCATTGATAAGCTGTTGCAGTATTCAGATTCTGTTCCCTGTAAAATTCGTGCCAAGCGGGGCTGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTTAGACGAACTAAAATTAGTGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACAGCAGACATGCTGGACTTGGCTGTCGACTACATTAAAGACCTTCAAAAGCAGGTTCAGACGCTTTCGGACAGTCAAGCTAAGTGTACGTGTTCGCGGGGGCAGCATCAATAA 1248 0.4671 MESDLQPHPSMFHEQQQQMNSGLTRYRSAPSSYFTNIIDREFYEHVFDRPSSPETERVFSRLLNSFGEDSPTRNQNLSSLALNPPEVKQEAIQQPQVIPSMTNEPVLLQQQQQQQQQLNNMDMYDSAASRNIYQSSAKPPLPNQTPSSANRLPPMKTGLGSNSNLIRHSSSPAGLFASINIDPGYIAAMRGMGTFGGGNTASEEPNFPAAGSLKNQPGYSPGLMSSIEEIGDKNNRELDNPQNEGFGEGQGSDFMTGFPVDNWDDSAIMSDNISGLKRYRDDDAKPFSGVNAAETKNERGSQSPSPLAHHLSLPKTAAEMAAIDKLLQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDSQAKCTCSRGQHQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0058 415 FunFam Transcription factor bHLH130 family 344 413 - -
Bisa12g0058 415 MobiDBLite consensus disorder prediction 294 309 - -
Bisa12g0058 415 SMART finulus 349 399 IPR011598 GO:0046983
Bisa12g0058 415 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 346 405 IPR036638 GO:0046983
Bisa12g0058 415 Pfam Helix-loop-helix DNA-binding domain 348 394 IPR011598 GO:0046983
Bisa12g0058 415 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 59 408 - -
Bisa12g0058 415 MobiDBLite consensus disorder prediction 283 309 - -
Bisa12g0058 415 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 343 393 IPR011598 GO:0046983
Bisa12g0058 415 Gene3D - 344 412 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0058 Bisa-ChrBisa12 948417 950384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0058 1 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 42.657 2.85e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa12g0058 HLH 5.4e-10 No_clan