Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0033 ATGTACCCAAAACGGTCTAGCCAAGGCAATGGCCCTGTTTCCAGACCAGTGCGCACAAGTGATAGGATCAAGTCAAGGCCAAACATGTATGGTCGACCTTACTTATATTACAACTCAAAGCGCACTAGGAAAAGCAAGAACAAAACAAGGACGGCAGCTTCCCAGATTGCTAAGATGTTGCGCCCAAGGGATCGGCCAGCACAGGATTCAAATGCTAATTCTGCCTCTACCAATCTTCGTCGTTCAACCAGGAAGAGAAGGATTTCTGTAAATCTGTCTGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTAATGAGGCCTGCATATCAACAACTAAGAAACCAGCTCGATCAAAGAGTGAGTCAGGATGAGTTGATGTCCCACAAGCGTAAAAGAGTTGTGGAAACTAAACCTAATCCTCGACGTGAAGGTTTGCGGCCTCGTCGTTCGAAAGCTAGTGTGAGAGAACACTTAAATTCAGAATCAGATGATGAGCAAGATCTTTCAGAAGAGAAGGTTGGACAAGATGAAACAGAAAATGGTAATGATGTTGAGGAAAATGATGCAGATGATGGTCAGAATGAGATTGAAGGAGATGCTGAGGGTGAAGATGAAGGTGAGGATGAGGATGAAGGAGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTCGAAATCGTGCAGATGTTCGTAGATTTTCAATGGAGGAAGGGAAGACCCGACCAAGATCACCTCGAAGAGTGTTGCATCAAGGTATGGGCGCTAAAGTCAGCAGGGATGTTAGGAAGGGTGGATCAAGAGTTCATAAGCGTCATCGTTTAGCAAGACCTGAAGATTCTGATGACTCCCTCCTTGTGGATGAGCTGGATCAAGGCCCTGCTATTCCATGGGGTCGAGGTGGCAGCAGATCTGGCCCACCTTGGCTTTTTGGTGGATTAGACATGCATGGAACAACAGCATGGGGATTAAATCTTGCTGCATCAGGTTGGGGTCATCAGGGTGATGCTTTAGCTACCTTGACCTCTGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGTGCAGATATTCAACCTTTACAGGTTGATGACAGTGTTAGTTTTGACGATATAGGTGGGCTCTCCGAATATATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTACTTTATCCAGATTTCTTTGCAAGTTATCACATTACTCCACCACGAGGGGTGTTGTTATGTGGACCTCCTGGCACAGGCAAAACATTAATTGCTAGAGCCTTAGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCGGATGTGCTTAGCAAATGGGTTGGTGAGGCTGAAAGACAATTGAAATTACTCTTTGAGGAAGCACAAAGGAATCAACCTTCTATCATTTTCTTTGACGAAATAGATGGACTTGCTCCTGTGAGGTCTAGCAAGCAAGAACAGATTCACAATTCTATTGTCTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATAGGAGCCACCAACAGGATTGATGCTATTGATGGGGCCTTGCGCCGCCCTGGTAGATTTGATCGTGAATTTAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAGATATTAGACATTCATACTCGTAAGTGGAAGCATCCTCCTTCAAAAGAACTGAAAAAGGAACTTGCAGCTAGTTGTGTAGGATATTGTGGTGCTGACCTAAAGGCTCTCTGTACTGAAGCTGCTATTCGTGCTTTCCGTGAAAGATATCCACAGGTTTATACAAGTGATGACAAATTTTTAATAGATGTTGATTCAGTCAAGGTTGAAAAGTATCACTTTATTGATGCAATGTCGACAATAACTCCTGCTGCTCATAGGGGTGCTATTGTGCACTCTAGGCCATTGTCTCTGGTTGTTCAACCATGTTTACAAAGCCATCTTGAGGAAGCCATGAATATCATATCTGATATTTTTCCTCCAGTTGCTGTTGCATCAGAATTGACCAAACTTTCTATGCTTTCCTATGGTTCTGCTATTCCACTTGTATATCGGCCTAGGCTTCTACTTTGTGGTGGTGAAGGTACTGGGCTGGACCATCTTGGGCCTGCTGTTTTACATGAACTGGAAAAATTTCCTGTTCATTCGCTAGGACTTCCATCTCTCCTCTCAGATCCTAGTGCAAAGACACCAGAGGAGGCTTTAGTACATATATTTGGTGAAGCTAGAAGAACAACGCCGTCTATTCTTTATTTACCGCAGTTTGATGTTTGGTGGGAAACTGCACATGAACAACTCAGGGCTGTTCTCTTGACTTTGCTAGAAGAATTGCCTTCTGACTTTCCTATATTATTACTTGGAACATCCTCAGTCCCGCTTGATGAAGTTGATGAAGTGCCTCCTTCATTGTTCCCTCATCGTTCAGTCTATAACATGAGCACACCATCTACTGAAGATAGAACATCATTTTTCAATTGTTTGATAGAGGCTGCTTTGTCTGTCTTGTTGGAGGGAATGAGCAAAAAAACCCAGGATACGGGTTCCCTTCCTGAACTTCCCAAGGCACCAAAATTAGCTAGTGGTCCAAAGGTATCTGAGCTAAAAGCAACTGTTGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATGTTATATGACAAACGATTTATTGCCTTCCATTATCCAGTCTCAGATGAAGATGCTCCTAATTATCGCTCCATTATCCAGAACCCAATGGATATGGCTACCATGCTGCAGCATGTTGATAATGGCCACTATATTTCATGTTCAGCATTTTTACAGGACATAGATCTTATAGTTTCCAATGCAAAGGCTTACAATGGAGAGGACTACAATGGGTCGAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATGCGGTGCATGGAATGCTCTCACAAATGGATCCTGCACTGGTTGCATACTGTGACAAGATTGCTGCCCAAGGTGGCCCAGTCCCTTTGCCTGATGAATTTGGTGGGTCTACATTCCCATCTACTCCTGTTGTACAGCTGGGAACCACCACTAGAATGAGTGCTCGACTTCGTAATGTCCAACCAGAGGTTAATATGGATCAAAGCTATGAAGCATTGAAGCGGACAAAAAGGAGCACAGATGTTACTCATTCAGAAGATAAATCACGACAGGATCCTGTACCGTCAAAGTCTTCCCAGGAATATCCGACCAATGACTTAGCTACTGAAGTGCTGGAGGAACATGCTTCGATTGATGGAAATTTAAATACAGCGTGTGCAAGTGGACAAGCTGATGATAGCAGCCCGGACGATGTCACAATGTTAGATGCTGAGTTTTCAACCCAAGTGGAGTCTGTCAAGCAGCTCTTTGTGAAGCGTACTGAAAATTACGGCATTCCACAGCTTGAAAGGCTTTACACCAGAATTATGAAGGGCGTTTTTGAAACCAAAGGTGAAGGGGCGAAAAATCTTAAGACTTCGGTGTTAAGGTTTCTGTTGAAGTTTGTAGAGGATGATGCAAATTTCTGA 3606 0.4409 MYPKRSSQGNGPVSRPVRTSDRIKSRPNMYGRPYLYYNSKRTRKSKNKTRTAASQIAKMLRPRDRPAQDSNANSASTNLRRSTRKRRISVNLSGFTDSSGAEDEDLMRPAYQQLRNQLDQRVSQDELMSHKRKRVVETKPNPRREGLRPRRSKASVREHLNSESDDEQDLSEEKVGQDETENGNDVEENDADDGQNEIEGDAEGEDEGEDEDEGDEDGDDEEGEEEQDGRRRYDLRNRADVRRFSMEEGKTRPRSPRRVLHQGMGAKVSRDVRKGGSRVHKRHRLARPEDSDDSLLVDELDQGPAIPWGRGGSRSGPPWLFGGLDMHGTTAWGLNLAASGWGHQGDALATLTSGIQTAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKELKKELAASCVGYCGADLKALCTEAAIRAFRERYPQVYTSDDKFLIDVDSVKVEKYHFIDAMSTITPAAHRGAIVHSRPLSLVVQPCLQSHLEEAMNIISDIFPPVAVASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLEELPSDFPILLLGTSSVPLDEVDEVPPSLFPHRSVYNMSTPSTEDRTSFFNCLIEAALSVLLEGMSKKTQDTGSLPELPKAPKLASGPKVSELKATVEAEQHALRRLRMCLRDVCNRMLYDKRFIAFHYPVSDEDAPNYRSIIQNPMDMATMLQHVDNGHYISCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDAVHGMLSQMDPALVAYCDKIAAQGGPVPLPDEFGGSTFPSTPVVQLGTTTRMSARLRNVQPEVNMDQSYEALKRTKRSTDVTHSEDKSRQDPVPSKSSQEYPTNDLATEVLEEHASIDGNLNTACASGQADDSSPDDVTMLDAEFSTQVESVKQLFVKRTENYGIPQLERLYTRIMKGVFETKGEGAKNLKTSVLRFLLKFVEDDANF 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 1 15 - -
Bisa12g0033 1201 FunFam ATPase family, AAA domain-containing 2 375 558 - -
Bisa12g0033 1201 Gene3D - 683 848 IPR027417 -
Bisa12g0033 1201 PANTHER AAA DOMAIN-CONTAINING 39 1014 IPR045199 -
Bisa12g0033 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 701 914 IPR027417 -
Bisa12g0033 1201 Gene3D - 553 638 - -
Bisa12g0033 1201 SUPERFAMILY Bromodomain 895 1009 IPR036427 GO:0005515
Bisa12g0033 1201 SMART bromo_6 897 1004 IPR001487 GO:0005515
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 182 224 - -
Bisa12g0033 1201 Gene3D - 375 645 IPR027417 -
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 1050 1095 - -
Bisa12g0033 1201 Pfam AAA+ lid domain 579 616 IPR041569 -
Bisa12g0033 1201 FunFam ATPase family AAA domain-containing protein 889 1017 - -
Bisa12g0033 1201 SMART AAA_5 413 554 IPR003593 GO:0016887
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 124 164 - -
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 90 109 - -
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 1 85 - -
Bisa12g0033 1201 Pfam Bromodomain 910 978 IPR001487 GO:0005515
Bisa12g0033 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 642 IPR027417 -
Bisa12g0033 1201 ProSiteProfiles Bromodomain profile. 920 982 IPR001487 GO:0005515
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 122 292 - -
Bisa12g0033 1201 CDD Bromo_AAA 897 1007 - -
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 1062 1086 - -
Bisa12g0033 1201 FunFam ATPase family AAA domain-containing protein 2B 553 638 - -
Bisa12g0033 1201 Pfam ATPase family associated with various cellular activities (AAA) 417 552 IPR003959 GO:0005524|GO:0016887
Bisa12g0033 1201 PRINTS Bromodomain signature 929 945 IPR001487 GO:0005515
Bisa12g0033 1201 PRINTS Bromodomain signature 945 963 IPR001487 GO:0005515
Bisa12g0033 1201 PRINTS Bromodomain signature 963 982 IPR001487 GO:0005515
Bisa12g0033 1201 Gene3D - 889 1017 IPR036427 GO:0005515
Bisa12g0033 1201 MobiDBLite consensus disorder prediction 225 255 - -
Bisa12g0033 1201 ProSitePatterns AAA-protein family signature. 522 540 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0033 Bisa-ChrBisa12 580059 588066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0033 363 617 Calmodulin-binding Proteins AT3G56690 36.680 1.07e-41 164