Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0030 ATGGGTTCTGTTCTTGCAAAAGAAGGGGATGCTGGGGATCTGAGAGTAGAAAATTGTAGTTGCAATGTTATCTGCTGGAGTTCGAGCTCCTTGATTGCTGCTGCTGTTCATGTGGATGATGGAGTTGTGGAGCATAACCGCCCTACTTCTTCAAGCATGACAGACTCATCCAATGGTTCTAGTTCAGTGATGAACGACAGTTGGTCAGGCTCTAAGAGCTCTGAGAAGCGGAAGCATTCCAAAACCAACTCATTGGTTCTGGATGGTATGTCTAGAATTATTGTGAAAGCTACTTACAGAGAAGATACAATACGTTTCAAGTTTGATAGGTCTGCAGGATGTTATCTGCTATTCGAAGAAGTTGAGACAAGATTCAAATTACAAAGTGGATCATTCCGGCTCAAATATTTAGATGATGAAGAAGAATGGGTGATGTTGGTAGATGACTCGGGTTTGCAAGAGTGTATAGAAATAATGGATGATACTGGGAGACGTAGTGTGAAGATTCTTGTCCGTGATATCTCTTGA 528 0.4186 MGSVLAKEGDAGDLRVENCSCNVICWSSSSLIAAAVHVDDGVVEHNRPTSSSMTDSSNGSSSVMNDSWSGSKSSEKRKHSKTNSLVLDGMSRIIVKATYREDTIRFKFDRSAGCYLLFEEVETRFKLQSGSFRLKYLDDEEEWVMLVDDSGLQECIEIMDDTGRRSVKILVRDIS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0030 175 MobiDBLite consensus disorder prediction 46 70 - -
Bisa12g0030 175 Gene3D - 90 173 - -
Bisa12g0030 175 Pfam PB1 domain 95 173 IPR000270 GO:0005515
Bisa12g0030 175 SMART PB1_new 92 174 IPR000270 GO:0005515
Bisa12g0030 175 PANTHER PROTEIN NLP8 45 174 IPR045012 GO:0003700
Bisa12g0030 175 MobiDBLite consensus disorder prediction 46 82 - -
Bisa12g0030 175 SUPERFAMILY CAD & PB1 domains 84 174 - -
Bisa12g0030 175 ProSiteProfiles PB1 domain profile. 92 174 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0030 21 175 NLP Transcription Factor Family AT2G43500 50.955 6.56e-39 139