Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0021 ATGGATAAGGACAAATCTCCTGGTCACGGTGGAGGTCTTCCACGTCCTTCGGGCCGTTTTTCAGGTTTTTCGCCAACTGGAAGCACTTTCAATGTGAAATCAGAGCCGCCGTCGTCGTCATCAACGTATCCTCCACTGGTGCCTGGTACCGGTTCGGATGCTGGTCACTTTGGGCAGGGATTGTCTGCAGATTATAGTAACTTCAGTCAAGATATTAGCAGAATGCCTGATAATCCTCCCAGAAATAGAGGTCACAGACGTGCCCATTCTGAGATTCTCACCCTACCTGACGATATTAGCTTTGACAGTGACCTTGGTATAGTTGGAGGTATTGACGGGCCCTCGTATTCCGATGAAACCGAGGAAGACTTACTGTCAATGTACCTTGATATGGACAAATTCAATTCGTCATCTGCTACATCTGCATTTCAAGTGGGTGAGCCTTCTACAGCTGCTGTGACATCAGCTTCAGCACCAACCTCGGCGCCAGCATCGGGAGCACCCACCCCGTCTGCAGAGAACGTTGCTATTGGTACTAATGAAAAGCCCAGAGTTAGGCATCAGCATAGCCAGTCTATGGATGGGTCTACAACCATCAAACCAGATATGCTAGTTTCAGGTTCGGAAGACATCTCTCCGCTTGATTCCAAAAAAGCCATGTCTGCTGCCAAGCTCGCAGAACTTGCTTTAATTGACCCCAAGCGTGCAAAAAGGATTTGGGCTAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGGAAGGTTCAGACGTTGCAAACAGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAATGGGCTGACTGCTGAGAACAGTGAACTAAAGCTAAGGTTGCAAGCCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAATGATGCGTTGAAAGAGGAAATTCAGCATTTGAAAGTACTGACTGGGCAAGCTATGCCAAACGGAGGACCTATGATGAACTTCACTTCTTTTGGAGGAGGCCAACAATTCTATCCCAACAACAATCATGCCATGCACACACTTTTGACTGCTCAACAGTTTCAACAGCTTCAAATTCATTCTCATAATCAGCAGCAGCAGCAGCATCAACTGCATCAGCTTCAGCAGCAGCAGGAACAGCAGCATCAACAAACGGGGGACCTGAAAATGAGAGGATCCACACCTTCTCCAAGTGGTTTAAGCTGTAGCCCAAGGAAAAAGCAGGAAGCTCTAATGGTATGGAATATATGGGATGACTTGCTTGCATTTTGGGATGAAAAGTGGGTTTGTTCAAAGACTTGGTGGCAGAAACAAGGAAGAAAAGATTGTGTGGAGTTGACTGATGTTTGCCTTAATATGGACTTTTTAAAAGCCATATTGTCCTCACTTTATCTTCTCATTTTAAAGAAAAAAGAAATCAAATATTTTGTTGCTGCAGTGGAGTTTGCAATTGATGGCTCTATCAATGGTGAGACATTAGGAAGTGTTACTGTCGGGGAGATTAGTAGCATGGGTGATGAAAACAAAACAGATGCAACTTCAGTTGACCCAACTTACACACGAGATCAAGATAATAAAATGACCCAAGATTATTCTGAAGGGAACACAATCCCATCAGCAGTTCCTGCAGTATCTGTTGTTTCAACTGATGAGCCGTATGTGGGTCAGGAGTTTGAATCAGAAGTAGAAGCACATGCCTTTTATAATGCATATGCCACACATGTCGGATTCATCATACGAGTAAGTAAACTCTCCCGATCAAGGCGTGATGGATCAGCGATTGGACGGGCACTTGTTTGCAACAAAGAGGGTTACAGAATGCCTGACAAGCGGGAAAAGATTGTAAGGCAAAGAGCGGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAGTTCTGGTAAGTGGGTTGTTACAAAGTTTGTAAAGGAGCACACACATCCTCTGACACCTGGAAAGGGTAGAAAGGACTGCATATATGAACAATATCCGAATGAGCATGATAAAATACTGGAGCTATCCCAGCAGTTGGCCATAGAGAAGAAGAGATGTGCAACTTACAAAAGGCATCTTGAATTGATATTCGAGCACATTGAGGAGCATAATGAGAGCCTTTCAAAGAAAATACGGCACATAGTAGACAGTGTGAAGGATTTGGAAACCAGAGAACTAAAGAGTCAGAGATAG 2232 0.444 MDKDKSPGHGGGLPRPSGRFSGFSPTGSTFNVKSEPPSSSSTYPPLVPGTGSDAGHFGQGLSADYSNFSQDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGIVGGIDGPSYSDETEEDLLSMYLDMDKFNSSSATSAFQVGEPSTAAVTSASAPTSAPASGAPTPSAENVAIGTNEKPRVRHQHSQSMDGSTTIKPDMLVSGSEDISPLDSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQAMEQQVHLQDALNDALKEEIQHLKVLTGQAMPNGGPMMNFTSFGGGQQFYPNNNHAMHTLLTAQQFQQLQIHSHNQQQQQHQLHQLQQQQEQQHQQTGDLKMRGSTPSPSGLSCSPRKKQEALMVWNIWDDLLAFWDEKWVCSKTWWQKQGRKDCVELTDVCLNMDFLKAILSSLYLLILKKKEIKYFVAAVEFAIDGSINGETLGSVTVGEISSMGDENKTDATSVDPTYTRDQDNKMTQDYSEGNTIPSAVPAVSVVSTDEPYVGQEFESEVEAHAFYNAYATHVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRKDCIYEQYPNEHDKILELSQQLAIEKKRCATYKRHLELIFEHIEEHNESLSKKIRHIVDSVKDLETRELKSQR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0021 743 SUPERFAMILY beta-sandwich domain of Sec23/24 347 407 - -
Bisa12g0021 743 MobiDBLite consensus disorder prediction 21 47 - -
Bisa12g0021 743 Coils Coil 250 319 - -
Bisa12g0021 743 MobiDBLite consensus disorder prediction 154 202 - -
Bisa12g0021 743 CDD bZIP_plant_RF2 235 284 IPR044759 GO:0003700|GO:0006355
Bisa12g0021 743 Gene3D - 233 310 - -
Bisa12g0021 743 FunFam probable transcription factor PosF21 233 286 - -
Bisa12g0021 743 MobiDBLite consensus disorder prediction 154 176 - -
Bisa12g0021 743 MobiDBLite consensus disorder prediction 62 76 - -
Bisa12g0021 743 Pfam bZIP transcription factor 234 288 IPR004827 GO:0003700|GO:0006355
Bisa12g0021 743 MobiDBLite consensus disorder prediction 371 416 - -
Bisa12g0021 743 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 232 295 IPR004827 GO:0003700|GO:0006355
Bisa12g0021 743 MobiDBLite consensus disorder prediction 1 90 - -
Bisa12g0021 743 SUPERFAMILY Leucine zipper domain 234 285 IPR046347 GO:0003700|GO:0006355
Bisa12g0021 743 MobiDBLite consensus disorder prediction 371 415 - -
Bisa12g0021 743 Pfam FAR1 DNA-binding domain 579 665 IPR004330 -
Bisa12g0021 743 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 20 397 - -
Bisa12g0021 743 SMART brlzneu 230 294 IPR004827 GO:0003700|GO:0006355
Bisa12g0021 743 Coils Coil 376 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0021 Bisa-ChrBisa12 417859 427397 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0021 19 363 bZIP Transcription Factor Family AT1G06070 70.435 1.75e-159 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa12g0021 FAR1 2.3e-29 CL0274