Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2682 ATGAAAAAGGAGGAAGATCGAGGTCAGTGTTCTTCTCAATCCATCAATAACATTCAGACCTATCAAGAGCAGCTACTTCTTCAGCAAATGATGCAGCACCAGCAGCAACAAAACGGTGACGTTTTGAGCTGCGACAACAACGCAAGAGGATTAACGTTCCCTGAGGTTTCCGTTTCTCCAATCCTTCAGCCGCCACCGCCATGGTCCCTCCCTCCGGTTCACTCCTTCAACACGTCCGAGCCGGGACCCACCTGGGAACCCGACCCGTTTTGGGCCTCTCCGCCCCTTTCGCCGTACGCGAGCCTCTTCAACCGGAGGGTTCCTTCTCTGCAGTTCGCGTACGAGGGTCTGTCTTCTGATCGTCACCATCTCCGGATCGTATCCGAACCTCTCAGAGTTGGCCCCCCGGCTCAACCCGGCTCAGCTCCGTTCGGTCTCCAAGCCGGGCTGGGCAAAATGACGGCTCAAGAAATCATGGACGCCAAGGCTCTGGCGGCTTCCAAGAGCCACAGCGAAGCCGAAAGAAGACGCCGCGAGAGAATCAATAACCATCTCACCAAGCTCCGAAGCTTATTGCCCAGCAATACCAAAACAGACAAAGCGTCGTTGCTGGCAGAGGTAATTCAGCACGTGAAGGAGCTGAAGCGTCAGACTTCAGTAATCGCAGAGACGAGCGCCGTGCCCACCGAGTCGGACGAGCTGAGCCTGAGCGTGGACAACGCGTCGGAGGAGGAGGGGCGGTTGGTGATGCGGGCCTCCCTCTGCTGCGACGACAGGTCGGATCTGTTGGCCGACCTCATCGACGCCCTCAAGGCCCTCAGGCTGCGCACCCTCAAGGCGGAGATCACCACCCTCGGAGGCCGCGTCAGGAACGTCCTCTTCGTCACCGCAGAAGAAGACCACCAGCGCCACCGGAGGCAGCAGCAGCAGCATTGTCTAAGCTCGGTGCAAGAGGCACTCAGGGCGGTGATGGACAAGAACGCCGCTACTGCTGGGGACGACAATGCCAATGGGACTGCTAAGAGGCAAAGAACTACTACTCATACTCTTTCTAATAGTACTATCAATGTCCTACCCCACAACACCTCTTTCACATAA 1098 0.5701 MKKEEDRGQCSSQSINNIQTYQEQLLLQQMMQHQQQQNGDVLSCDNNARGLTFPEVSVSPILQPPPPWSLPPVHSFNTSEPGPTWEPDPFWASPPLSPYASLFNRRVPSLQFAYEGLSSDRHHLRIVSEPLRVGPPAQPGSAPFGLQAGLGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLTKLRSLLPSNTKTDKASLLAEVIQHVKELKRQTSVIAETSAVPTESDELSLSVDNASEEEGRLVMRASLCCDDRSDLLADLIDALKALRLRTLKAEITTLGGRVRNVLFVTAEEDHQRHRRQQQQHCLSSVQEALRAVMDKNAATAGDDNANGTAKRQRTTTHTLSNSTINVLPHNTSFT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2682 365 CDD ACT_UUR-ACR-like 253 324 - -
Bisa11g2682 365 PANTHER TRANSCRIPTION FACTOR BHLH30 29 349 IPR045847 GO:0003700|GO:0006355
Bisa11g2682 365 MobiDBLite consensus disorder prediction 329 348 - -
Bisa11g2682 365 FunFam transcription factor bHLH30 160 223 - -
Bisa11g2682 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 221 IPR036638 GO:0046983
Bisa11g2682 365 Pfam Helix-loop-helix DNA-binding domain 168 214 IPR011598 GO:0046983
Bisa11g2682 365 Gene3D - 159 224 IPR036638 GO:0046983
Bisa11g2682 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
Bisa11g2682 365 CDD bHLH_AtAIG1_like 160 239 - -
Bisa11g2682 365 SMART finulus 171 220 IPR011598 GO:0046983
Bisa11g2682 365 MobiDBLite consensus disorder prediction 332 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2682 Bisa-ChrBisa11 52261881 52264469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2682 11 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 54.775 2.59e-105 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2682 HLH 1.6e-12 No_clan