Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2651 ATGTCGGCGGCGTCACCGTCTCCGGCAGCGACCACCGCCACACCACCACCACTAACCCCTTCCTCCAATAGTAGTGCACCACCGCCGCAACCCTCTTCACCCGCACCGGAAAGCTCAACGCCGCCGACATCGTCCAGTCCACCATCTCAGTCGCCGCCCCCAGCTACTCCATCGGCACCTCTCCCCGCTGTGCCGTCATCTCCTCCGCCGGTCTCATCGTCGCCTCCGCCATCACAGCCACCCCGGGCATCACCTCCCACTCCGTCTGGAACTCCACCGCCATTGTCACCCAGTGTTGCTCCACCTCCTCCTCCACAGTCAGTTTCACCCACTTCACCACCACCAGCCCCATCAAATACTTCCCCACCAGCTTCTCCTGTGATTCCATCACCGCCATCACAATCACCGGCTCCACCAGTAAGTCCTCCACCAACAAATTCATCTGTGCCTCCACCATCTAACCCGCCTACACCGTCAGCAAACCCTCCCAACGACTCACCTCCACCACCGGCGGCTAGCCCCCCGGTAAATTCACCTCCTCCTACAGAAGCTGTGCCACCCCCTCGAAATTCACCTCCACCGCCAGCATCTGTGCCGCCGCCAAAAAATTCACCCCCACCGCCACCAGCTGTGCCGCCTAGTGGGTCTTCTCCTACACCACCACCATCAACTCCTAGAAATTCACCTCCTCCTCCAGCTCCTAGACCTTCGAGTAGTGCACCTCCTCCCCCTAGAATAAGTCCTCCGCCTAGTTCTCAACCAAATCCATCTCCTTCAAATTCCACACCAAAGTCATCTCCTCCGCCGCCTGCAATCCGATTGGCTCCGCCTCCGCTTCCGCTTATTTCACCACCAGCTTCCCAAACTCCTTCCCCAGCATCACAAAATGGAGCAGAAAGTTCGAATTCCAATGACAGTGGTGGCATCGGTACTGGTGGTGCAGTGGCTATAGGTGTAGTGGGAGGGATTCTGTTGCTTACCTTCATTGGAATTGCTATCTGGTGCATGAGAAGGCAAAAGAAACAGAAGCCCGTGAATGGTGGTTACATCATGCCATCCACACTCGGCTCACCAGAGTCGGATTCATCCTTTTTTAAGACGCATTCTTCAGCTCCTCTTGTACAAAGCGGTTCTGGTAGTGACTCTTTGACTGTGTACACACCATCTGAGCCGGGTGGACTAGGCAACTCAAGGTCATGGTTTACATATGAAGAACTAGTCAAGGCTACAAATGATTTTTCACCACAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATGCCTACCTGATGGAAGAGAGATAGCAGTCAAACAACTGAAAATTGGTGGAGGTCAGGGCGAGAGAGAATTCAAAGCTGAAGTGGAGATTATTAGCCGCATTCATCATCGCCATTTGGTTTCTCTGGTGGGCTACTGCATTTTAGATAGCAGAAGGCTGCTTGTCTATGACTATGTCCCCAACAATACCCTCTATTATCATCTTCATGGGGAAGGTAGGCCAGTTCTGAGCTGGGAAAAACGTGTGAAAATTGCTGCTGGTGCAGCTCGAGGACTTGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCACAGGGATATCAAGTCATCAAACATTCTTTTAGACTACAACTTTGATGCTCGAGTCTCAGACTTTGGGCTAGCCAAATTAGCTCTTGATGCAAATACACATATAACCACTCGTGTCATGGGAACTTTTGGATATGTTGCACCTGAATATGCTTCAAGTGGCAAATTGACCGAGAAGTCTGATGTATATTCTTTTGGGGTCGTGCTTCTGGAGCTCATTACTGGACGGAAGCCAGTAGATGCATCACAACCCTTGGGGGACGAGAGTCTAGTTGAATGGGCTCGACCTCTGCTGAGTCATGCACTTGATAATGAGGAATTTGAAGGTTTGACAGATCCAAGGCTTGAAAAGAACTTTGTTGAAAGTGAGATGTTTCGCATGATTGAAATTGCTGCTGCTTGTGTGCGGCATTCAGCTGCCAAGAGGCCTCGAATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGCTACTTCAGATCTAACCAATGGAATGAGACCAGGGGAAAGTGAGGCGTTCAACTCCGCGCAGTCTGCAGAAATAAGATTATTCCGGAGGATGGCATTTGGTAGTCAAGATTATAGCACGGACTTTTTTAGCCAGGCTAGTTTGAATACGTAA 2220 0.5072 MSAASPSPAATTATPPPLTPSSNSSAPPPQPSSPAPESSTPPTSSSPPSQSPPPATPSAPLPAVPSSPPPVSSSPPPSQPPRASPPTPSGTPPPLSPSVAPPPPPQSVSPTSPPPAPSNTSPPASPVIPSPPSQSPAPPVSPPPTNSSVPPPSNPPTPSANPPNDSPPPPAASPPVNSPPPTEAVPPPRNSPPPPASVPPPKNSPPPPPAVPPSGSSPTPPPSTPRNSPPPPAPRPSSSAPPPPRISPPPSSQPNPSPSNSTPKSSPPPPAIRLAPPPLPLISPPASQTPSPASQNGAESSNSNDSGGIGTGGAVAIGVVGGILLLTFIGIAIWCMRRQKKQKPVNGGYIMPSTLGSPESDSSFFKTHSSAPLVQSGSGSDSLTVYTPSEPGGLGNSRSWFTYEELVKATNDFSPQNLLGEGGFGSVYKGCLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCILDSRRLLVYDYVPNNTLYYHLHGEGRPVLSWEKRVKIAAGAARGLAYLHEDCNPRIIHRDIKSSNILLDYNFDARVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHALDNEEFEGLTDPRLEKNFVESEMFRMIEIAAACVRHSAAKRPRMGQVVRAFDSLATSDLTNGMRPGESEAFNSAQSAEIRLFRRMAFGSQDYSTDFFSQASLNT 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2651 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Bisa11g2651 739 ProSiteProfiles Protein kinase domain profile. 413 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2651 739 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 323 720 IPR047117 -
Bisa11g2651 739 CDD STKc_IRAK 419 689 - -
Bisa11g2651 739 FunFam Proline-rich receptor-like protein kinase PERK8 385 488 - -
Bisa11g2651 739 MobiDBLite consensus disorder prediction 288 306 - -
Bisa11g2651 739 Gene3D Phosphorylase Kinase; domain 1 390 488 - -
Bisa11g2651 739 Gene3D Transferase(Phosphotransferase) domain 1 489 704 - -
Bisa11g2651 739 SUPERFAMILY Protein kinase-like (PK-like) 394 684 IPR011009 -
Bisa11g2651 739 MobiDBLite consensus disorder prediction 10 287 - -
Bisa11g2651 739 CDD TM_EGFR-like 312 343 - -
Bisa11g2651 739 Pfam Protein tyrosine and serine/threonine kinase 417 685 IPR001245 GO:0004672|GO:0006468
Bisa11g2651 739 FunFam proline-rich receptor-like protein kinase PERK8 489 700 - -
Bisa11g2651 739 SMART serkin_6 413 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2651 739 ProSitePatterns Protein kinases ATP-binding region signature. 419 441 IPR017441 GO:0005524
Bisa11g2651 739 MobiDBLite consensus disorder prediction 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2651 Bisa-ChrBisa11 51822249 51827108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2651 184 735 Trihelix Transcription Factor Family AT5G38560 59.075 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa11g2651 PK_Tyr_Ser-Thr 4.9e-44 CL0016