Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2650 ATGTACGAAGAGGTCCCAGGTACCGGTTTTTCAGCTGGAACGGCTTCGTTGCTGTCAGAAGATGGCTTCTCCCAAATGGTCACTTTTGCTGCCACACAGACCCATAACACTGGCTTTTCAGAGAATATGGGTCTTTCTATGGAAAACTTAGCCTTCGGTTCAGAAGATGCCATTGCTAACACTGCCTTCACAAATGGAGCTTCTGCTACTTCTGCATTAATAATGGAACAAAACCCCTTTGGCGATACATATTGGGTGGAACAGGTCAATCATAATCATCGTGACTCAAATCAGCTAGCCCTTTCCTTTGATCATTCCACATGGAACATTTCCAATATACAAAATTATCATCTTCAGCATCACCATCAACCACTACTTTACCCTACACCACGAGATCATCACCTTCATCTCTACAGCTTACCCACAACTGCCTCAACCTCTTCCTTTGTAAACTCATCCATCTCTCATGAAAACCCAACCACCCAGAAGACCATCAATCTTCAAAATCCAACTGGCCATGGCGGCTTAGTTGGTGGGTCCTATCCAAATTTGGGGCCAGAAAGCACTGATGTTTCCTCGGTTTTGCATTTGAACCCGCCGGCACATGCGTCAGCTCTCAGAGAGTTGTTTCAGTCTCTACCTTCAAGTGATTTTCTGTTATTTGGTGGAGAAGATGACAGAGATTTTGATGATAATGGAGAACTCAAGTTTAGCCGGGATATGTCTGCTGTTGGTAGAAGAGGAGGAGGAAGAGGCAAAGGGATCAAACAGGTCACTAATGAAAAGCAAAGGAGAGTGAAGTTTAGTAGCAAATTCGATGCCTTGAGAGAACTAATCCCGAACCCCACTAAGAATGATAGAGCATCTGTGCTGTGGGATGCTATTGAGTACATCCGAGAGCTGCATAGATCAGTGGATGATCTCACATTACTAGTGGATAAAAAGCGATACGAGAAAGAGAGGTTCAAGAGGCAGAAGGTTGAAGAGGCAGCAGAAGCTTTAGAGGACATACAGAGCTGCAACTTTAAGCCGCTGGGTGAACCTGATCATCACCTTCATAAATGCATAATCAGGAGCTCTTGGCTTCAGAGAAAATCCAAAGATACTGAGGTTGATATCAGAATCGTTGAGGACGAGGTCACAATCAAACTTGTGCAGAGAAAGAAAAAGATCAATTGCTTGCTCTATGCTTCCAAGGCTTTAGATGAACTCGAGCTGGATATCCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGTTTCTTGTTCAACAGCAAGAACAATCAACAACGATGCTCGAGTCAAGAGACGAAATGTACGACGAGATCACTGGTTTTGCAGCAGGAACGGCGCCGTTGCTGTCAGAAGATTGCTTCTCCCAAATGGTTAATTCAGATTCGGACACCACCACCAGTTGGCAGTTCTGTTTCCACACAGACCCTGACCCACACCCCTTTCTTGCCAAACAATGTGGATCTTTCTGTGGAAAGTTTAGCCTTCGCTTCAGAAGATGCTAATGCTATTGCTAACATTGCCTTCACAAATAGAGCTTCTGCTTCCTCTGCATTCATGCAACAAAACACCTACGTTAATAATATTGGCAATACGCACTTAGTGGAGGAACAGGTCAATTATCACCATGATTCTACTCAGCTAGCCCTTTCCTCCACCAGTACTCCAAATGGGACACTTCTAATATGCAAAATCATCATCCTCTGGATCAAGATCACCAATCACTTATTTACCCTGAAGGAATTAAAAGGATTAAATTTCTAA 1779 0.439 MYEEVPGTGFSAGTASLLSEDGFSQMVTFAATQTHNTGFSENMGLSMENLAFGSEDAIANTAFTNGASATSALIMEQNPFGDTYWVEQVNHNHRDSNQLALSFDHSTWNISNIQNYHLQHHHQPLLYPTPRDHHLHLYSLPTTASTSSFVNSSISHENPTTQKTINLQNPTGHGGLVGGSYPNLGPESTDVSSVLHLNPPAHASALRELFQSLPSSDFLLFGGEDDRDFDDNGELKFSRDMSAVGRRGGGRGKGIKQVTNEKQRRVKFSSKFDALRELIPNPTKNDRASVLWDAIEYIRELHRSVDDLTLLVDKKRYEKERFKRQKVEEAAEALEDIQSCNFKPLGEPDHHLHKCIIRSSWLQRKSKDTEVDIRIVEDEVTIKLVQRKKKINCLLYASKALDELELDIQHVAGGHIGDFCSFLFNSKNNQQRCSSQETKCTTRSLVLQQERRRCCQKIASPKWLIQIRTPPPVGSSVSTQTLTHTPFLPNNVDLSVESLAFASEDANAIANIAFTNRASASSAFMQQNTYVNNIGNTHLVEEQVNYHHDSTQLALSSTSTPNGTLLICKIIILWIKITNHLFTLKELKGLNF 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2650 592 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 252 301 IPR011598 GO:0046983
Bisa11g2650 592 PANTHER TRANSCRIPTION FACTOR BHLH91 65 431 IPR045895 GO:0006355|GO:0048658
Bisa11g2650 592 Pfam Helix-loop-helix DNA-binding domain 260 301 IPR011598 GO:0046983
Bisa11g2650 592 Coils Coil 317 337 - -
Bisa11g2650 592 CDD bHLH_AtMYC1_like 258 321 IPR045896 -
Bisa11g2650 592 Gene3D - 255 329 IPR036638 GO:0046983
Bisa11g2650 592 SMART finulus 258 307 IPR011598 GO:0046983
Bisa11g2650 592 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 313 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2650 Bisa-ChrBisa11 51785025 51792112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2650 243 427 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G06170 49.479 1.25e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2650 HLH 3.8e-09 No_clan