Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2627 ATGGAAAGAAGGGAGAGTTTTGCTCTGCGTGTTATAGCTGTGTTCTTCTTGCTGTGGACTCCAGCGTCTGGTTTGATTTCGGCTGAAGGTGTCAACTACGAAGTGCTAGCTCTTGTAGGCATTAGAGCTTCTCTAAAGGATCCTCGTAAAGCCCTTAATCACTGGGATGAAAATGCTGTGGATCCTTGTAGCTGGGCTTTGATCACTTGCTCTGTTGATCATTTTGTGACTGGCCTGGCACTTCCAAGCCTAAACTTATCGGGTACCCTTTCTCCAAGCGTCGCCAACTTGACATATCTTCGGTTTCTGCTCTTGCAAGATAACAAGATATCAGGACGAGTTCCCTCTGAGCTGGGGAGGCTACACATGCTTGAAACTCTTGATCTTTCTGATAATTCTTTCACCGGTCAACTTCCAGATAGTCTCTCCCATATGAAGAGTCTTCACTATTTGAGGCTGAACAATAATAGTCTTATTGGACCAATTCCCTCCTCTTTGGCTAACATGACCCAACTTGCTTTCCTGGATATTTCTTATAACAACTTGAGTGGACCTGTTCCTGGAATAAGTGCCAAGACATTCAGTATTGTAGGAAATCCCCAGATATGTGCACCTGGAAGGCACCAAAACTGCTTCAGAACTGCACCACTTTCTTCTAACTTGACTATCTCCCAAGATTCAGCATCCCCTGGAAAACCAAAGAACCACAAGGTTGCCCTGGCATTTGCTTCAACCCTGAGCTGCATCTGCTTACTAATTCTGGGCTTTGGCTTCGTCCTCTGGTGGAGACACAGACGTAACAAACAAGTCTTCTTCGATTTTAATGAAGAACATGGTGAAGAGGTGTGGCTGGGAAACCTGAGGAAGTTCGAATTCCGAGAAGTGGAGGCAGCGACGAACAAGTTCAGCAGCAAGAACCTGATAGGGAGGGGGGGCTACGGCGATGTGTACAAAGGGTATCTCCCCGACGGAGCAGTCATCGCAGTGAAGAGGCTCAGAGACGGCAGTGCCATTGCAGGGGAGACTCAGTTCCAGACTGAGGTGGAGATGATCAGCCTGGCTCTGCATCGCAACCTGCTTCGCCTCTATGGCTTCTGCATCACTCCCACGGAGAGAATCCTGGTTTATCCCTACATGTCCAACGGCAGCGTGGCTTCTCGTCTCAAAGCCAAGCCAGTTCTGGGATGGGGGACCAGGAAGAGGATAGCGTTGGGAGCTGCAAGGGGGTTACTGTATCTGCATGAGCAGTGTGATCCCAAGATTATTCACAGGGATGTCAAGGCTGCCAATATATTGCTTGATGATTACTGTGAGGCTGTGGTGGGGGACTTTGGGCTGGCAAAGTTGTTGGATCATAAGGATTCACATGTGACCACTGCTGTGAGAGGCACTGTGGGACACATAGCCCCAGAGTACCTCTCAACAGGGCAATCCTCTGAGAAAACTGATGTGTTTGGGTTTGGAGTCCTCTTGCTTGAACTCATCTCTGGCCAAAGAGCACTTGAATTTGGCAAAGCAGCAAACAACAAAGGAGCCATGCTTGATTGGGTGAAGAAAATACAGCAAGAGAAGAAATTTGACTTGTTAGTTGACAAGGACCTGAGAAACAACTACGACAGAGTAGAGGTTGATGAGATGATTCGAGTGGCTCTTTTATGCACTCAGTACAATCCGAGTCACAGACCCAAGATGTCTGAAGTGGTGAGGATGCTGGAAGGAGATGGTCTTGCAGAGAAATGGGAATCTTCACAGAGTTCTGCCTCAACAAGCAGAGGAAATGAACTCTCTGCTTCAGAACGTTACTCTGATCTCAACGACGACTCTTCACTGCTTCATCAGGCAGTGGAGCTTTCTGGACCAAGGTGA 1866 0.4796 MERRESFALRVIAVFFLLWTPASGLISAEGVNYEVLALVGIRASLKDPRKALNHWDENAVDPCSWALITCSVDHFVTGLALPSLNLSGTLSPSVANLTYLRFLLLQDNKISGRVPSELGRLHMLETLDLSDNSFTGQLPDSLSHMKSLHYLRLNNNSLIGPIPSSLANMTQLAFLDISYNNLSGPVPGISAKTFSIVGNPQICAPGRHQNCFRTAPLSSNLTISQDSASPGKPKNHKVALAFASTLSCICLLILGFGFVLWWRHRRNKQVFFDFNEEHGEEVWLGNLRKFEFREVEAATNKFSSKNLIGRGGYGDVYKGYLPDGAVIAVKRLRDGSAIAGETQFQTEVEMISLALHRNLLRLYGFCITPTERILVYPYMSNGSVASRLKAKPVLGWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHKDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELISGQRALEFGKAANNKGAMLDWVKKIQQEKKFDLLVDKDLRNNYDRVEVDEMIRVALLCTQYNPSHRPKMSEVVRMLEGDGLAEKWESSQSSASTSRGNELSASERYSDLNDDSSLLHQAVELSGPR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2627 621 MobiDBLite consensus disorder prediction 579 612 - -
Bisa11g2627 621 SMART serkin_6 302 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2627 621 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Bisa11g2627 621 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Bisa11g2627 621 FunFam Somatic embryogenesis receptor kinase 1 271 378 - -
Bisa11g2627 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 581 - -
Bisa11g2627 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Bisa11g2627 621 Pfam Protein kinase domain 303 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2627 621 FunFam Somatic embryogenesis receptor-like kinase 1 379 591 - -
Bisa11g2627 621 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Bisa11g2627 621 Gene3D Transferase(Phosphotransferase) domain 1 379 590 - -
Bisa11g2627 621 SUPERFAMILY L domain-like 33 196 - -
Bisa11g2627 621 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Bisa11g2627 621 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2627 621 MobiDBLite consensus disorder prediction 579 621 - -
Bisa11g2627 621 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Bisa11g2627 621 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bisa11g2627 621 SUPERFAMILY Protein kinase-like (PK-like) 286 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2627 Bisa-ChrBisa11 51585721 51589022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2627 17 621 Receptor kinase-like Gene Family AT5G16000 69.756 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa11g2627 Pkinase 8.9e-44 CL0016