Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2626 ATGGATCAAGATACTTCCAGTGTTGATTCAATGGCTCAAGATAATAAGCGTCATGGTCTCTTGAAAGATCAAGTTCATTTAGTTAAAAGGAAGGACTCTGATCGCTTTGAGATTGCCCCAATCCGTGAACGTCTATCATTTGAAAAGGGTTTCTTTATTGTAATCCGTGCTTGCCAATTGCTTGTCCAAAAAAATGATGGAATAGTATTGGTAGGGTTGGCGGGTCCTTCAGGGGCTGGGAAGACTGTGTTTACAGAAAAAATACTCAACTTCATGCCTGGCATTGCAGTCATTTCAATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGAAACTTTGATGATCCACGGTTGACAGACTATGACACGTTGCTCCAGAATGTCGATGATTTGAAGGCAGGAAAACCAGTTGAGGTTCCAATCTATGACTTTAAGTCCAGTTCACGTACAGGATACAGAACAGTTGAAGTCCCCAGCTCCCACATTGTGATTATAGAGGGCATTTATGCTTTGAGTGAGAGGTTGCGACCCCTACTGGACCTTCGAGTATCTGTCACAGGCGGAGTACACTTGGACCTTGTCAAACGAGTTATTCGTGACATACAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACAGTATACCCAATGTACAAAGCCTATATTGAGCCAGATCTCCAGACAGCACATATCAAAATTGTCAACAAGTTCAATCCATTTACTGGATTTCAGAGTCCTACTTACATATTAAAGTCAGCAAGGAATGTAACAGTTGATGAAGTTAAAGCCGCTCTCTCTGATGATTATAAGGAAACAACAGAGCAGACTTATGACATATATCTTCTGCCACCTGGTGAAGATCCAGAAACTTGTCAATCATATTTACGGATGCGGAACAAGGATGGCAAATACAGTCTTATGTTTGAGGAATGGGTTACAGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCCCTGGGGTACACAATAGCTGCCATCCTTAAAAGAAACAGCCATGTATTCCGTAATGACAGTGTTTGTGTGAAACTTGATTGGCTTGAGCAACTTAAACGACATTATGTTCAGGTGCAAGGAAGAGATCGCTTAGTCGTAAAATACTTAGCACATCAGCTGGGTTTGGATGGTTCTTACATTCCGCGTACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTAAATGAAGTTATGGCCCTGCCAGATGATTTAAAGGCAAAGCTTAGCCTACATGAGGATTTGGTGTCAAGTCCGAAAGAAGCATTGTCTAGAGCCTCTGCAGACAGGATTGCCATGAGAAAGAGGAGTGGCATGTCACGATCATATACAAACCAGAGGGACAAGAATCTAGCCAAACTTGCATTATATACTGGCAAGAATTGCGGGTTTGGTGAAAGAATTCTAGATTCTCCGATGACACCATCAAACCAGGGAGCCATCACTCAGCTTTCAGAACAAATTTCTTCCCTTAATGATAGAATCGATGAGTTTACAATTCGTATTGAGGAGCTGAACTCTAAGTTAAAGACCAATAAAACCTCTCCAAGCCAACAGAATTTGTCTCTCCAAGCTGAAGCCTGCAATGGTTCTGCTCCCACCTCTCACTTCCTTACTGGTCGGGGTAATGGCTCCCTAACTGGATCCATCTCCTCATCTTCATTGCAATTGGCTAAAGAGTCAACTTTAATTGAAGAGGTATCGGGCATGGTGCGGGGTCAGCATCAGATCATGCATCAACTAGACAATCTGAATAATCTTCTCCGTCGAAGCTTGTCAGAGAAGTCTCAACAAACAAGAAGCAGCAGAAAAACCATGGCTACTGAATCAAAATCAGAATCCGCTGCTGTGCGTGCTATGGTAACAGTGGCTATTGGGTGTTTGGGGATCTTCATGATGAGGGGAAACACAGGAACGATGTTTCTGGTGATAGTTCCATCACTGTGTAAGCTAAAGGAGAGTCCATTTGGAGCTGTAGACGTCTGTAATTCTGAAGCAATGGCCTATGCTTCTCTGTCTATGGCTAGACAGCAAAAGAAAACAGGTCAGAAGGAAATAGAACAGTTCACCAAGCCAAAACTAAGCAAGATATTATTGACAGTTGAGTCCAATACAAAAACAAACTTCACAAACGTTATTCTTACGAGTCCAAAGACCCAGAAGAATGCTAGCTCAAAAGAAACTCACAAGGAAATTTAA 2265 0.4185 MDQDTSSVDSMAQDNKRHGLLKDQVHLVKRKDSDRFEIAPIRERLSFEKGFFIVIRACQLLVQKNDGIVLVGLAGPSGAGKTVFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVDDLKAGKPVEVPIYDFKSSSRTGYRTVEVPSSHIVIIEGIYALSERLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKIVNKFNPFTGFQSPTYILKSARNVTVDEVKAALSDDYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIAAILKRNSHVFRNDSVCVKLDWLEQLKRHYVQVQGRDRLVVKYLAHQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKAKLSLHEDLVSSPKEALSRASADRIAMRKRSGMSRSYTNQRDKNLAKLALYTGKNCGFGERILDSPMTPSNQGAITQLSEQISSLNDRIDEFTIRIEELNSKLKTNKTSPSQQNLSLQAEACNGSAPTSHFLTGRGNGSLTGSISSSSLQLAKESTLIEEVSGMVRGQHQIMHQLDNLNNLLRRSLSEKSQQTRSSRKTMATESKSESAAVRAMVTVAIGCLGIFMMRGNTGTMFLVIVPSLCKLKESPFGAVDVCNSEAMAYASLSMARQQKKTGQKEIEQFTKPKLSKILLTVESNTKTNFTNVILTSPKTQKNASSKETHKEI 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2626 754 CDD UMPK_like 70 242 - -
Bisa11g2626 754 ProSiteProfiles CYTH domain profile. 251 413 IPR023577 -
Bisa11g2626 754 Pfam Phosphoribulokinase / Uridine kinase family 71 239 IPR006083 GO:0005524|GO:0016301
Bisa11g2626 754 SUPERFAMILY CYTH-like phosphatases 269 410 IPR033469 -
Bisa11g2626 754 PRINTS Uridine kinase signature 68 85 - -
Bisa11g2626 754 PRINTS Uridine kinase signature 135 150 - -
Bisa11g2626 754 PRINTS Uridine kinase signature 191 201 - -
Bisa11g2626 754 PRINTS Uridine kinase signature 227 240 - -
Bisa11g2626 754 Gene3D - 257 411 - -
Bisa11g2626 754 Pfam CYTH domain 267 407 IPR023577 -
Bisa11g2626 754 PANTHER URIDINE KINASE 31 426 - -
Bisa11g2626 754 Gene3D - 69 250 IPR027417 -
Bisa11g2626 754 MobiDBLite consensus disorder prediction 615 634 - -
Bisa11g2626 754 Coils Coil 503 530 - -
Bisa11g2626 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 239 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2626 Bisa-ChrBisa11 51576759 51585570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2626 70 239 PRT Gene Family AT5G40870 26.816 9.61e-18 85.1