Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2617 ATGATCCCCAGTGAGATCAGAGGAATCCACTACCTAACCTCAGAGGACCCACTCTTCTTCCCTCAAAGCTTCATCAATGATTTCCAAAACCGTCACCTGAGCACCCTCTTCACCGATTTCTCTGCAACCCCTTATCGCCATCACGAACTCAACCACGTTGTTCCTTGTTCCTCAACTTCCGACGAAGCAGAGGATCAGCAGATAGGCGTGATCGACGAGAGGAAGCAGAGGCGGATGATATCGAACAGAGAGTCGGCTCGGAGGTCGAGGATGAGGAAGCAGAGGCACCTGGACGAGCTGTGGTCGCAGGTGGTCAGGCTTCGCTCAGAGAACCACAACCTCATCGACAAACTCAACCGTGTGTCCGAGTCCCATGATAAAGTTCTTCAGGACAACGCTAAGCTCAGAGAAGAAACTTCCCATCTTCGCCAAATGGTCGCTGATTTGAAATTTGGAAGCGCTTTCGCTGACGCCCTCAGAGATTTTGATGACCCTCCCTGTACCAATGCCCCCATGTAA 519 0.5164 MIPSEIRGIHYLTSEDPLFFPQSFINDFQNRHLSTLFTDFSATPYRHHELNHVVPCSSTSDEAEDQQIGVIDERKQRRMISNRESARRSRMRKQRHLDELWSQVVRLRSENHNLIDKLNRVSESHDKVLQDNAKLREETSHLRQMVADLKFGSAFADALRDFDDPPCTNAPM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2617 172 Gene3D - 72 127 - -
Bisa11g2617 172 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 27 155 IPR044521 -
Bisa11g2617 172 FunFam BZIP transcription factor 72 123 - -
Bisa11g2617 172 SUPERFAMILY Leucine zipper domain 74 123 IPR046347 GO:0003700|GO:0006355
Bisa11g2617 172 CDD bZIP_plant_GBF1 75 126 IPR045314 GO:0003700|GO:0006355
Bisa11g2617 172 Pfam bZIP transcription factor 74 132 IPR004827 GO:0003700|GO:0006355
Bisa11g2617 172 Coils Coil 118 138 - -
Bisa11g2617 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 72 135 IPR004827 GO:0003700|GO:0006355
Bisa11g2617 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 77 92 IPR004827 GO:0003700|GO:0006355
Bisa11g2617 172 SMART brlzneu 70 134 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2617 Bisa-ChrBisa11 51493083 51493601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2617 12 156 bZIP Transcription Factor Family AT3G30530 56.376 5.02e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa11g2617 bZIP_1 5.1e-13 CL0018