Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2609 ATGGGTGACAAGGAAAATTTTGAGCCAGACAGAAACGAGGATCCTATGAGTTATTCAACTGGTATGCCCTCTGATTGGCGATTTGGAGGTGCCAGTCTTGCTAACACACATGTGGGTTTGGTTCCCATGGGAAATTCAATGAACGTTAGCAGAGGTGATCTTATCGGTTCTTCTTCCTGTTCTTCTGCTTCAATGGTGGACTCTTCTTATGGTCCTAATTTCTGGGCCCATGCCCCCGCTCAGAACTTGGGATATTGTGACGTTAATGTCCCCAACAATGGTGGTAGCCCATCAAACACAATTGGGTTCAGAAAAGATGGCCTTGCCTTCTCAAGAGAAATGGGTTGGAATAATCCTGCAAATTTTATGTTAAAAGGGGATGCTTTCTTACCAAATGGACCAGTTCTTCCCCAGAGCTTATCTCATCAGTTTCCAGCTGACTCTGCCTTTATTCAACGTGCCGCGAGGTTCTCATGCTTTAGTGAAGGGAATTTTGGCGATATGGTGAACTCATTTGGGATTCCTCAATCCATGGTGGGTTTGTGTGCTAAGAGTGGGGTTCCTGGAGGACAAGCTCAAGAAAGTGACCTGAATGTAGGTGAAGCTGCAACATATGTGTCTACTCCATCTATTGAGCATCTGGCTGCTAAAGGAAACCCACACAAGAATGACGAAAGAAGTGAGGGGCATGTAAAATCTCAAGATGAAGCAAAACAAGATGCAGGTCAATCTAGCAGTGATGATGGTGCTGGTGGTCAAGATGATTCCCCTATGTTGGAGGGTACAAGTGGAGAGCCTTCTGCTAAAGAAGTAAACTTGAAGAAAAGGAAAAGAAGTGGGCAGGATGCAGATAATGATAAAGACAATGGAGCTCCTGCACTGGTGAGTGAAGCTGTGAAGGACAATTCTGAGAGTCGACCAAAGGGAGATCAACCACCAACTTCAACAACAAAGACTTCTGGGAAGAATGCCAAACAGGGGTCTCAAGCTTCTGATTCACCAAAGGAGGAATACATACATGTTAGGGCTCGCCGAGGTCAAGCCACAAATAGCCATAGCCTTGCTGAGAGAGTAAGGAGGGAAAAGATTAGTGAAAGAATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACTGGCAAGGCAGTGATGCTTGATGAAATCATTAACTATGTACAGTCACTTCAACGACAAGTTGAGTTTTTATCCATGAAACTTGCAACAGTGAATCCACGGTTAGATTTTAATGTTGAGGGACTTCTCGCTAAAGATATCCTTCATCAACGGCCTGGACCTTTATCTGCACTTGGTTTTCCTCCAGATATGCCTATGGCTTTTCCTGCATTACATCCATCTCAACCAGGACTGGTTCAGCCAACCATTCCTGGCTTGGCAAAGTCATCCGATATGCTTCGGAGATCTGTTCATCCACAGTTGGCACCCTTGACCGGAGGTTTTAAGGAGCCTAGTCAGCTACCTGATGTTTGGGAGGATGAGCTTCACAATGTTGTACAGATGGGCTTTGCAGCAACTGCTCCCCTTAGTGGCCAAGATGCTGATGGTCAGATGAAAGTTGAACTGTGA 1590 0.4535 MGDKENFEPDRNEDPMSYSTGMPSDWRFGGASLANTHVGLVPMGNSMNVSRGDLIGSSSCSSASMVDSSYGPNFWAHAPAQNLGYCDVNVPNNGGSPSNTIGFRKDGLAFSREMGWNNPANFMLKGDAFLPNGPVLPQSLSHQFPADSAFIQRAARFSCFSEGNFGDMVNSFGIPQSMVGLCAKSGVPGGQAQESDLNVGEAATYVSTPSIEHLAAKGNPHKNDERSEGHVKSQDEAKQDAGQSSSDDGAGGQDDSPMLEGTSGEPSAKEVNLKKRKRSGQDADNDKDNGAPALVSEAVKDNSESRPKGDQPPTSTTKTSGKNAKQGSQASDSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNVEGLLAKDILHQRPGPLSALGFPPDMPMAFPALHPSQPGLVQPTIPGLAKSSDMLRRSVHPQLAPLTGGFKEPSQLPDVWEDELHNVVQMGFAATAPLSGQDADGQMKVEL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2609 529 Gene3D - 344 417 IPR036638 GO:0046983
Bisa11g2609 529 FunFam Basic helix-loop-helix transcription factor 344 416 - -
Bisa11g2609 529 MobiDBLite consensus disorder prediction 269 285 - -
Bisa11g2609 529 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 397 IPR011598 GO:0046983
Bisa11g2609 529 Pfam Helix-loop-helix DNA-binding domain 350 398 IPR011598 GO:0046983
Bisa11g2609 529 MobiDBLite consensus disorder prediction 215 336 - -
Bisa11g2609 529 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g2609 529 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 222 449 IPR024097 GO:0006355
Bisa11g2609 529 CDD bHLH_AtBPE_like 337 422 - -
Bisa11g2609 529 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 416 IPR036638 GO:0046983
Bisa11g2609 529 MobiDBLite consensus disorder prediction 308 333 - -
Bisa11g2609 529 SMART finulus 353 403 IPR011598 GO:0046983
Bisa11g2609 529 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2609 Bisa-ChrBisa11 51406689 51409436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2609 56 512 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 46.970 3.88e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2609 HLH 6.7e-06 No_clan