Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2598 ATGAGAGCAGGGAAGGGGAATCAAGAGGACGATGAATACGAGGAGGAGGAGTTCTGTTCCAAAAAAGAAGGTTCTTCGTCTGCGAATAACAACAATAGCACCAACAACACCAACAAAGATGCAAAAGCTATTGATAAGGCTAGTGCTATAAGATCAAAACATTCTGTTACTGAGCAGCGAAGAAGGAGCAAGATAAATGAGAGATTCCAGATATTGAGGGATCTCATACCACATAGTGATCAAAAAAGGGATACAGCATCATTCCTGTTAGAGGTGATTGAGTATGTCCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGCACATATCAGGGCTGGGGTCAGGAGCCCACAAAGTTGATGCCATGGAGGAACAATCACTGGCGCGTTCAAAGCTTTGGCCAGCCTCAGGCTGTAAAGAATGGTTCTGGTCCAGTATCACCTTTTCCTGGGAAGTTTGATGAAAGCAATATTAGTGTCTCTCCAACTATTAGTGGCTCCCAGAGCATGATAGATCCTGAACATAGCAGGGATATTGTCAGCAAAACAGCAGAGAGGCAATCTGAGTTAGAAAGCAAGGGGATGCCTCTACCCATGCCAATGCATGCAAACATGTCTGTCCCTGTCAGAAGTGATGGTGCACTTGCCCATCCGCTTCAGGGGCCTGTTTCTGATGTGCAATCGGCTGAATGTCCAGCTACTAGTGAACCACAGAACCAACAAGACGAGCTGACAATTGAAGGAGGGACAATTAACATCTCAAGTCTATACTCCCAAGAGCTGTTACACAATCTGACTCAAGCGCTACAGAGTGCTGGTTTAGATCTGTCACAGGCTAGCATCTCAGTTCAAATTAATCTTGGGAAGAGGGCGAACAAAGGACTAGACTGTGGAACATCTGCTCCTAAGAATCGTGATAATACCCCTTCCAGCAATCAAGCAATTGCACATTTTAGAGATTCAGGCAGTGGAGATGACACAGATCAAGTACAGAAACGGCTGAAAACTTAG 1011 0.4491 MRAGKGNQEDDEYEEEEFCSKKEGSSSANNNNSTNNTNKDAKAIDKASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGTYQGWGQEPTKLMPWRNNHWRVQSFGQPQAVKNGSGPVSPFPGKFDESNISVSPTISGSQSMIDPEHSRDIVSKTAERQSELESKGMPLPMPMHANMSVPVRSDGALAHPLQGPVSDVQSAECPATSEPQNQQDELTIEGGTINISSLYSQELLHNLTQALQSAGLDLSQASISVQINLGKRANKGLDCGTSAPKNRDNTPSSNQAIAHFRDSGSGDDTDQVQKRLKT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2598 336 MobiDBLite consensus disorder prediction 44 62 - -
Bisa11g2598 336 MobiDBLite consensus disorder prediction 321 336 - -
Bisa11g2598 336 FunFam BHLH domain class transcription factor 47 119 - -
Bisa11g2598 336 MobiDBLite consensus disorder prediction 301 318 - -
Bisa11g2598 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 99 IPR011598 GO:0046983
Bisa11g2598 336 Pfam Helix-loop-helix DNA-binding domain 51 100 IPR011598 GO:0046983
Bisa11g2598 336 MobiDBLite consensus disorder prediction 212 243 - -
Bisa11g2598 336 SMART finulus 55 105 IPR011598 GO:0046983
Bisa11g2598 336 MobiDBLite consensus disorder prediction 23 42 - -
Bisa11g2598 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 121 IPR036638 GO:0046983
Bisa11g2598 336 Gene3D - 47 119 IPR036638 GO:0046983
Bisa11g2598 336 MobiDBLite consensus disorder prediction 227 243 - -
Bisa11g2598 336 MobiDBLite consensus disorder prediction 292 336 - -
Bisa11g2598 336 CDD bHLH_AtBIM_like 48 124 - -
Bisa11g2598 336 MobiDBLite consensus disorder prediction 1 62 - -
Bisa11g2598 336 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 7 336 IPR044295 GO:0003700|GO:0006351|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2598 Bisa-ChrBisa11 51246771 51250528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2598 1 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 59.804 1.96e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2598 HLH 1.8e-13 No_clan