Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2572 ATGGAATCTTGGAGTTACCCCTCAGAAGAGAGAGGCTATTTGCTTTCTGATGAAGTGGATTTTTCAGTCGAAGCTTTTATGAGAGGCAGAAAAGCGTGGGATAACAAAGCCCAAGCCTCATGTAACTTCGAGAGAGATGAATTTAGTTCAGATGGAGAGGGAGTTAAAAGCATGGAGGTTTTTGACTTGGGATTTCCTGACTCGTTTCTAAATGAGCTAGATAGAGATAATTATAGTAGAAGAGTGAATTCCTCTACGCATGTTAATGCTATGGATTCATGTTTGGTGGAAGAAGAGTCTGAGTCAAAGCATCCGGGTTCTCTAGTTGAATTTAAAAGTCATGATTCGTCATTGATCGATTTGAAGCTAGGGAGGTTAGCAGATTGTAAAGATGCAACCAGTGCTAATAAACCCGCTAAGAGAGCTCGTACTTCTGGTTTGCCTACTCAGACACCTGTATGTCAAGTTTATGGTTGTAACATGGATCTGAGCTCCTCTAAAGAGTACCACAAAAGGCATAAAGTTTGTGATGCTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAGCAGAGGTTTTGTCAGCAGTGCAGTAGGTTCCATTTACTAGCTGAGTTTGATGAGGGTAAGCGCAGTTGTCGCAGACGCCTAGCAGGACATAATGAACGCCGAAGAAAGCCGCAGTTTGATTACATGTCTGTTAAACCATGCAAGATGCTGCAGTCATATCAAGGTACCAAGTATTTGGAGGCTTCATTCCAGAAGAGACCCCAGTTTGCCTTTCAAGACATGTTTGAAAGTGGCATTTTTCACCCGATAAAATATGAACAAACCGATCACAGCAATCATATCACACATGATCAGAAGCTATGTAGAGCCTCAGACACCAGCTGTGCTCTCTCTCTTCTGTCATGCCACCCAGCAGGAAATTCAGTAGCTAGTTCCCTTGTTTGTCACAGCATCTGCTCAAACCACCGCGAGGAACAAGTTTCCGAAATCCCTTTGGGGGTAAACTCTGTGGATAAGCATGTACAAGATAAATCTTCTTTGCATGGGATGAACTTGACAGAAGCTATCAAGAATGGATCCATGTGTCAGCCATCAGACTTATCAAATGTGAAACATCATCTTTCCCCTGAAGATGGAGCCACCGTTGATCTGTTCCAATTGTCATCACATCTTCAAAGGGTTCATGGGCATGTTCAAAGGGATATGCAAAGTCAAATCAGGGCACCAGAAAAAGTAAGCATCGAGTGTTTTCGGGAAGAGCACAAAGTGTATGGACTATGGAGAGCTAGTTCACTTTTTGCAGATTTCACCAAAGATTTTCCTACATTTTCTGTAAAGTTCAAGAGGGGAAGGGGTTTGTTTAACGAGGCCAAGCTTTAG 1392 0.426 MESWSYPSEERGYLLSDEVDFSVEAFMRGRKAWDNKAQASCNFERDEFSSDGEGVKSMEVFDLGFPDSFLNELDRDNYSRRVNSSTHVNAMDSCLVEEESESKHPGSLVEFKSHDSSLIDLKLGRLADCKDATSANKPAKRARTSGLPTQTPVCQVYGCNMDLSSSKEYHKRHKVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDEGKRSCRRRLAGHNERRRKPQFDYMSVKPCKMLQSYQGTKYLEASFQKRPQFAFQDMFESGIFHPIKYEQTDHSNHITHDQKLCRASDTSCALSLLSCHPAGNSVASSLVCHSICSNHREEQVSEIPLGVNSVDKHVQDKSSLHGMNLTEAIKNGSMCQPSDLSNVKHHLSPEDGATVDLFQLSSHLQRVHGHVQRDMQSQIRAPEKVSIECFREEHKVYGLWRASSLFADFTKDFPTFSVKFKRGRGLFNEAKL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2572 463 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 92 378 IPR044817 GO:0003677
Bisa11g2572 463 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
Bisa11g2572 463 SUPERFAMILY SBT domain 152 234 IPR036893 GO:0003677|GO:0005634
Bisa11g2572 463 Gene3D - 145 215 IPR036893 GO:0003677|GO:0005634
Bisa11g2572 463 FunFam Squamosa promoter-binding-like protein 14 145 215 - -
Bisa11g2572 463 Pfam SBP domain 154 227 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2572 Bisa-ChrBisa11 50871132 50876454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2572 1 398 SBP-box Gene Family AT1G69170 33.718 8.43e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa11g2572 SBP 1.1e-31 No_clan