Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2566 ATGGAATGGAGAAATTTAAACGAGGAGATATTTAGGGATAACGTAGTAGTGCCCCGTGCAGCTCTTTTGTCAGGAAATACAGCATGCAATGTGATTCCATTGGATATCATGAACCTGGAAGAGAAAGTCACCATGGACTTGGTTCAACCTTCTGAACACTTCTGCTATGTCCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGGATACCATGCAAAAGAATGCTGGACACAGTGACAGTGAAATGTGGACACTGCAGCAACCTCTCGTTTCTGAGCACCAGACCTCCTCCATCTCATCACAACGAAACCAATACTAACAATATTGATCACACACTCACCCTACAGGGGTTTTATAGTGATTTCAAGAAAGGACAAGCATCGTCTTCGTCGACGTCGTCGTCCTCATTAATTACGTCCAGTGATCCAGTGTCCCCCAAAGCAGCACCTTTTGTTGTAAAACCACCTGAAAAGAAACACCGACTACCTTCGGCTTACAATCGTTTCATGAAAGAGGAAATACAGCGCATCAAAGCAGCCAACCCTGAGATTCCTCATCGTGAAGCTTTCAGTGCTGCTGCCAAAAATTGGGCTAAGTACATTCCAAATTCACCAACCACCTCACTTTCTGGAAGCAAAAACAAGGTAAAAATTATACGGAATGATGGAGCTGGGGCAACGGAATATTAA 690 0.4435 MEWRNLNEEIFRDNVVVPRAALLSGNTACNVIPLDIMNLEEKVTMDLVQPSEHFCYVRCNFCNTVLAVGIPCKRMLDTVTVKCGHCSNLSFLSTRPPPSHHNETNTNNIDHTLTLQGFYSDFKKGQASSSSTSSSSLITSSDPVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWAKYIPNSPTTSLSGSKNKVKIIRNDGAGATEY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2566 229 MobiDBLite consensus disorder prediction 126 156 - -
Bisa11g2566 229 CDD HMG-box_SF 161 199 - -
Bisa11g2566 229 SUPERFAMILY HMG-box 144 199 IPR036910 -
Bisa11g2566 229 PANTHER PROTEIN YABBY 6-RELATED 49 215 IPR006780 GO:0007275
Bisa11g2566 229 Gene3D High mobility group box domain 152 204 IPR036910 -
Bisa11g2566 229 MobiDBLite consensus disorder prediction 126 143 - -
Bisa11g2566 229 FunFam protein CRABS CLAW isoform X3 152 211 - -
Bisa11g2566 229 Pfam YABBY protein 50 200 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2566 Bisa-ChrBisa11 50776276 50778676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2566 37 216 C2C2-YABBY Transcription Factor Family AT1G69180 65.217 8.40e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa11g2566 YABBY 3.2e-57 CL0114