Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2556 ATGGACCAGAGCAGTTTCTCTGTCCGAACCCGAAAAGCCCGACCCAAATCTGAGCTGTATTCCACTGTCGTCGTCCACGACGACGACGACGACGACGGATACGGCGATGACGGTGGCTACGATAAGCGTGACCAAAGCTGGCGGGGACGGAATGCCAAAAGCTCGGGTCCCGAGGGCGATCCATATGCGACGATGGTCTACAAAGACAATGGCCCTGAAGAAGATGAAGATGACTATTCCTCCCTTCCTCCCCTTCTCAAGCGCCTACCCAAGGATTTCGGTGGCGGAGCCTCGATGGATTACGAAGAGGATCCTGACGACGACGGCGGCGATTTTAGCACCATGATCGTCAAGACAGACCGAAGTGGGCAACGGAATCGGTCCTCTTCGGGTTCGACCTGGAAGTCTCAGAAATCACCTTCGAGTTATGCAAGTCCAAGGACAGGACTGGGTGGTGGGGAGGATGAAGATGATGATGGTGACCAAGGTTTCTCAACCTTTGTCGTACGTTCAACGGCAAGGTCCAGTGAGAGAGAGTCGGTCAGCGGAACAATGGTGCGGAGGACAAGTGCTGGTGTTGGTAGTGGCGGAACTGGCGCTGGGTCGACAATGGAAAGGGCGGTGGCGAGTATGCAGGCATCGGGCGAGCTAGGCTTCGGGAAACAGAGGAGGGGAAGTAACGACGAGGGTAGGCAGTCCATAGGGACGAAGGTTTCGTCGAGTTCGATTCCGGAAAGTGTTACCAGAGAGGATCCTACAACCAAGTACGAATTGCTTAATGAACTTGGGAAGGGATCTTACGGAGCTGTTTACAAAGCTAGGGATTTAAAAACCTCCGAGCTTGTTGCTATCAAAGTCATATCACTTTCCGAAGGGGAGGAGGGATATGAGGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGTAATCATCCAAATGTTGTCCGCTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTTATGGAATACTGTGGTGGTGGTAGTGTTGCTGATGTGATGAATGTGACCGAGGAGCCACTGGATGAGGGTCAGATAGCATATATCTGTAGAGAAGCACTGAAGGGGCTTGACTATTTGCACTCGATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTGTTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCGGCACAGCTTACAAGGACCATGTCAAAGCGCAACACGTTCATTGGAACACCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGACGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCAGAGGGCCTTCCTCCTAGATCAGCAGTCCATCCAATGAGGGTAAGTCTTCTGACTAAATCTAGGCTCTTGTTTAATATATACCATGTGAACTTTAATCTTATAAATGACAGTAGCGTGTGA 1461 0.4962 MDQSSFSVRTRKARPKSELYSTVVVHDDDDDDGYGDDGGYDKRDQSWRGRNAKSSGPEGDPYATMVYKDNGPEEDEDDYSSLPPLLKRLPKDFGGGASMDYEEDPDDDGGDFSTMIVKTDRSGQRNRSSSGSTWKSQKSPSSYASPRTGLGGGEDEDDDGDQGFSTFVVRSTARSSERESVSGTMVRRTSAGVGSGGTGAGSTMERAVASMQASGELGFGKQRRGSNDEGRQSIGTKVSSSSIPESVTREDPTTKYELLNELGKGSYGAVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADVMNVTEEPLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVSLLTKSRLLFNIYHVNFNLINDSSV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2556 486 MobiDBLite consensus disorder prediction 215 252 - -
Bisa11g2556 486 MobiDBLite consensus disorder prediction 117 146 - -
Bisa11g2556 486 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 237 461 - -
Bisa11g2556 486 MobiDBLite consensus disorder prediction 231 249 - -
Bisa11g2556 486 MobiDBLite consensus disorder prediction 165 197 - -
Bisa11g2556 486 Gene3D Transferase(Phosphotransferase) domain 1 252 478 - -
Bisa11g2556 486 ProSitePatterns Protein kinases ATP-binding region signature. 262 285 IPR017441 GO:0005524
Bisa11g2556 486 ProSiteProfiles Protein kinase domain profile. 256 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2556 486 SUPERFAMILY Protein kinase-like (PK-like) 237 466 IPR011009 -
Bisa11g2556 486 MobiDBLite consensus disorder prediction 7 28 - -
Bisa11g2556 486 FunFam Aurora kinase A 248 337 - -
Bisa11g2556 486 Pfam Protein kinase domain 256 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2556 486 MobiDBLite consensus disorder prediction 1 203 - -
Bisa11g2556 486 SMART serkin_6 256 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2556 Bisa-ChrBisa11 50655909 50663062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2556 1 464 MAP Kinase Kinase Kinase Kinase AT1G69220 59.129 3.11e-158 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Bisa11g2556 Pkinase 2.8e-61 CL0016