Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2485 ATGGCTTCTTCTCTCTTCTCTTTATTTCCACACCCTTCTTCTCTTTCCTCTTCTGTTTCCCACACAGTCAAATCATTCTACTTCCCATTCCCACACAAAACCCCACTTCTTCACCTCAGAAAACCTCTCTCCGCCAAATCTCTTGCTTCCCTTGAAATCGACACGTCATTGTCTCCGGCGATTCAGACCTTCTGGCAGTGGCTGCGGGACGAAGGGGTTATCTCCGACAAGACGCCGGTGAAGCCCGGCGTCGTGCCGGAGGGCCTGGGATTGATTGCACAGAGAGACGTTTCCCGAAACGAGGTCGTTTTGCAGGTGCCGAAGAGGCTGTGGATAAACCCCGATGCGGTAGCGGCGTCGGAGATTGGGAACGTGTGTAGCGGATTGAAGCCATGGGTGTCCGTTGCTCTGTTCTTGATCAGAGAGAGGTTGAGGGATGAGTCTCCGTGGAAGCATTACTTCAAAATTCTTCCTGAGGTCACCGATTCCACTATATACTGGTGGGAATTTGCTGAATTCATTCATACATGCAGGTCAGAGGAGGAGCTCTCTGAGCTTCAAGGTACTCAACTTCTGAATACAACACTGGCTGTGAAAGAATACGTGCAGAACGAGTTCATGAAACTGGAAGAAGAAACCATAGTCCCTAACAAGAAGCTTTTCCCTTTTCCCATAACACTGGACGACTTCTTCTGGGCATTCGGAATTCTGAGATCGAGGGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTGTTATTCCACTTGCAGACCTGATAAACCATAGTGCGAGAGTGACGACAGAGGATCATGCTTATGAAGTTAAAGGAGCAGCAGGCCTTTTCACTTGGGATTACCTCTTTTCTCTCAGGAGCCCCCTCGCTGTGAAGGCTGGGGAGCAGATATTTATACAATATGATCTGAAGAAGAGCAATGCTGAGTTAGCTCTGGATTATGGCTTCATTGAACCAAATGCAGCTAGGAATGCATACACCCTCACACTTCAGATATCAGAGTCAGACCCATTTTTTGATGACAAACTGGACATTGCTGAGTCGAATGGCTATGGCGAGACTGCATACTTTGACATCTTCTTTGACCGTCCTCTTCCACCAGGATTGCTTCCATATCTGCGTCTGGTAGCGCTTGGGGGTACCGATGCTTTCCTATTGGAAGCTTTGTTCAGAAACTCCATTTGGGGTCATCTCGAGTTGCCTGTGAGCCGTGACAATGAGGAGCTAATATGCAGAGTTGTTCAGGATGCTTGCAGATCTGCCCTTGCTGGTTATCATACTACCATTGAAGAGGATGAGAAGTTAAAAGAAGCAAATCTAGATTCAAGGCTTGCAATAGCAGTGGGAATAAGGGAAGGGGAGAAGAAGTTGCTGCAGCAGATCGCAGGAATCTTCAAGGAGAAAGAGATGGAGTTGGATGAGTTAGACTATTATCAAGAAAGGAGGCTCAAGGATCTTGGTCTCTGCGGGGAGAGTGGTGAAATCCTTGGGGACCTCAGCAAGTTCATGTAA 1524 0.4764 MASSLFSLFPHPSSLSSSVSHTVKSFYFPFPHKTPLLHLRKPLSAKSLASLEIDTSLSPAIQTFWQWLRDEGVISDKTPVKPGVVPEGLGLIAQRDVSRNEVVLQVPKRLWINPDAVAASEIGNVCSGLKPWVSVALFLIRERLRDESPWKHYFKILPEVTDSTIYWWEFAEFIHTCRSEEELSELQGTQLLNTTLAVKEYVQNEFMKLEEETIVPNKKLFPFPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEVKGAAGLFTWDYLFSLRSPLAVKAGEQIFIQYDLKKSNAELALDYGFIEPNAARNAYTLTLQISESDPFFDDKLDIAESNGYGETAYFDIFFDRPLPPGLLPYLRLVALGGTDAFLLEALFRNSIWGHLELPVSRDNEELICRVVQDACRSALAGYHTTIEEDEKLKEANLDSRLAIAVGIREGEKKLLQQIAGIFKEKEMELDELDYYQERRLKDLGLCGESGEILGDLSKFM 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2485 507 PIRSF RMT_SET 1 506 IPR011192 GO:0009507|GO:0030785
Bisa11g2485 507 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 329 500 IPR036464 -
Bisa11g2485 507 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 12 505 IPR011192 GO:0009507|GO:0030785
Bisa11g2485 507 SMART set_7 76 312 IPR001214 GO:0005515
Bisa11g2485 507 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 322 486 - -
Bisa11g2485 507 Gene3D set domain protein methyltransferase, domain 1 57 321 - -
Bisa11g2485 507 ProSiteProfiles SET domain profile. 71 306 IPR001214 GO:0005515
Bisa11g2485 507 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 57 320 - -
Bisa11g2485 507 CDD SET_RBCMT 72 321 IPR044431 GO:0016279|GO:0018022
Bisa11g2485 507 Pfam SET domain 88 305 IPR001214 GO:0005515
Bisa11g2485 507 Pfam Rubisco LSMT substrate-binding 338 462 IPR015353 -
Bisa11g2485 507 Gene3D - 322 486 IPR036464 -
Bisa11g2485 507 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 55 453 - -
Bisa11g2485 507 SUPERFAMILY SET domain 57 325 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2485 Bisa-ChrBisa11 49705020 49710093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2485 58 261 NAC Transcription Factor Family AT3G56570 25.701 9.37e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa11g2485 SET 6e-09 No_clan