Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2481 ATGGGTAGGTCACCGTGCTGTGAGAAGGTGGGGTTAAAGAAAGGGCCATGGACTCCTGAGGAAGACCAGAAGCTCATGGCTTACATTGAACAGCATGGCCATGGAAGCTGGCGTGCACTTCCCTCAAAAGCTGGTCTTCAGAGATGTGGGAAGAGTTGCAGACTGAGGTGGACTAATTACCTAAGACCTGATATCAAACGAGGAAAATTCAGTTTGGAGGAAGAGAGAACCATCATTCAACTTCATGCCCTTCTGGGAAATAGATGGTCAGTCATAGCATCTCACTTGGCCAAGAGAACAGACAACGAGATCAAGAACTACTGGAACACCCACCTCAAGAAGAGGCTCACCAAAATGGGAATAGACCCTACCACACACAAGCCTAAGCTCCACGCCCTCGGCTCGGCTGGCTCCGGCCACCCTTCCAAGGACGCCGCCAACCTCAGCCACATGGCTCAGTGGGAGAGTGCTCGCCTCCAAGCCGAAGCTCGCCTCGTCAAGGAGTCCCAGTCCCAGTTGCAGCTCGGCTCACCGTCGTCTCCCCATCCGGTTCGGCTCGTTCTCAACAAGATCCCGGCTCAGCCGTCGCTTCCCCCCTGCCTCGACGTCCTCAAAGCTTGGCAAAACTCGCGGTCCTCCCCGACAGCAAACGACAAAAACAACGTCCCCATGCAGCACAACACCTACGCCTTGATGCTCTCCGCCGCCGACGACGCCCTCGAGTCTCCCACCTCCACCTTGACCTTCATGGACACCCTTTTACCCCCTCCACCCATCTGCACCTCAGGCGCCGTCGCCGATGGGCCAATCCATGACAAATACAAATACAATATACTTCCTCCTGCTACTACCACTACCCCTCTTAACTCCGATATCGCTTCCGACACCGGCGCCGTCGTGAGGTCGTGGGGGTGTTTGAACCAGGAGGAGGGAGAAAGGAGGATGATGAGGACGGGTTTGGAGGACGACGACATAATGGTGGCAGTGGAAGCATTTATGGGGGACAGGTATAAAAAGAATAATCACGTGGCAGCAGAAGTACTGTCGAGTTTTTCCAACAGTGTAACTGTAATGGAAGGTTTGAGTTTGATTAACGAGGATAATGCTCTGGGTGTAGTGGCTCATGATTCCAACGAGAATGAGAACGTAGCAGCAGGGGAAGAAGACAGCTTCGAATTCATCGATAACGGCGACGAGGATATATGGAAGCATGTTTGCGGTGGCGAGAATTTTGAGCTCACTCAATAA 1248 0.5321 MGRSPCCEKVGLKKGPWTPEEDQKLMAYIEQHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLEEERTIIQLHALLGNRWSVIASHLAKRTDNEIKNYWNTHLKKRLTKMGIDPTTHKPKLHALGSAGSGHPSKDAANLSHMAQWESARLQAEARLVKESQSQLQLGSPSSPHPVRLVLNKIPAQPSLPPCLDVLKAWQNSRSSPTANDKNNVPMQHNTYALMLSAADDALESPTSTLTFMDTLLPPPPICTSGAVADGPIHDKYKYNILPPATTTTPLNSDIASDTGAVVRSWGCLNQEEGERRMMRTGLEDDDIMVAVEAFMGDRYKKNNHVAAEVLSSFSNSVTVMEGLSLINEDNALGVVAHDSNENENVAAGEEDSFEFIDNGDEDIWKHVCGGENFELTQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2481 415 CDD SANT 69 112 IPR001005 -
Bisa11g2481 415 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa11g2481 415 FunFam MYB-related transcription factor 13 66 - -
Bisa11g2481 415 CDD SANT 16 61 IPR001005 -
Bisa11g2481 415 FunFam MYB transcription factor 68 129 - -
Bisa11g2481 415 SMART sant 66 114 IPR001005 -
Bisa11g2481 415 SMART sant 13 63 IPR001005 -
Bisa11g2481 415 Gene3D - 13 66 - -
Bisa11g2481 415 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa11g2481 415 Gene3D - 69 116 - -
Bisa11g2481 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 209 - -
Bisa11g2481 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa11g2481 415 MobiDBLite consensus disorder prediction 121 145 - -
Bisa11g2481 415 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa11g2481 415 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa11g2481 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa11g2481 415 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2481 Bisa-ChrBisa11 49530313 49534407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2481 1 261 MYB Transcription Factor Family AT3G01140 60.595 2.12e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa11g2481 Myb_DNA-binding 6.1e-15 CL0123