Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2479 ATGGTAGGACCAAAGATGATGGAAGAGACACCAAAATCACACTTAGGAATTTCCGAAGAGTATATGCAACAGCTCAGATCCAAAGCAACAGAGCTACTCCTAAGAGAAGAATGGAAGGAATGCATCGAAGCCTATTCACACTTCATTGCTCTCTGCGAAGACCAAATCTCTCGGACCCATTCACAATCAGACTTCGATCAACTTCAAAACCTTCGAAAATCCCTCCGCCTAGCGCTGTCAAACAGAGCCGAAGCAAGATCGAGGTTGAAGGATTTTCATTATGCGTTGGACGACTGTGATTTAGCTTTGGAAATCGACAGTACCCATTTGAAGACTCTAATCTGTAAAGGTAAGATCCTGCTCAATCTCAATATGTATTCGATGGCTCTGGATTGTTTCAGAGTCGCCCTTCTTGATCCGCAGGCTGGTGGGAACTCCGAAAACCTCAATGGTTATGCGGAGAAGTGTAAAAAACTCGACTTTCTCTCGAGAACTGGAGCTCTGGATCTATCAGATTGGGTTTCAAATGGGTTTCGAGGAAAGTCTCCAGAGCTTGCAGAATACATTGGTTCTGTGCAAATCAAGAAATCCGAGATCAGCGGACGTGGGTTGTTTGCAACTAGGAACATCGATGCAGGGACATTGATTTTGGTCACAAAGGCAATAGCGATGGAAAGGAGTATATTGGGGGGAAAAGATTTGAGTGAGGAAGCTCAATTGGTGATGTGGAGGAATTTCATCGATCAAGTTTCGGACTTAACCAGAAAATGTCACAGAACAAGCAATTTGATCAGCAAACTGTCTAGTGGAGAAGACGAAGATGCACTCGATGTTCCTGATATAGCCCTCTTTAGGCCAGAAACAGGGGAGATCAAGAACGAGCAATCCAGTGAGTATGAAATGATTGATATCGATAAGTTACTAGCTATATTGGATGTGAATTCTCTAACTGAGGATGCAGTTTCAGCCAATGTATTGGGGAGGAAGAGCAATGATTACTATGGCGTAGGGCTATGGTTGCTACCTTCCTTCATCAACCATTGCTGCTGCCCCAATGCAAGGAGATTGCATGTAGGTGACTATCTAATAGTTCATGCTTCAAAAGATATCAAGGCAGGTGAAGAAATTACCTTTGCCTATTTTGACCCACTTTCTCTATTGCACAAGCGAAAGGAAATGTCAATGACATGGGGAATCCATTGCAGATGCAAGAGATGCAAGTTTGAGTCAGAAATGTTCTGCAAACAAGAGATAAGAGAGATTGAGATTGGTCTTGAAAGAGGGATGGATGCGGGAGGTGCAGTGTTTAAATTAGAAGAAGAAATGAAGAGGTGGAAGGTGAGGGGGAAAGAGAGAGCCTATGTGAGGGCATCATTTTGGACTGCATATTCTGAGGTTTACAGGTCGGAGAGGTGCATGAAGAGGTGGGGAAGGAGGATTCCAGCAATGGAGGCTGTGGTTTATAGCATCATAGAAGTGATGGGAGGTGATGAGAGGTTGCTTAGGATTCTGATGGAGGCGCTCAAGAAAAATGGTGGTGGTGGTGGTGGACTGGCAGAGATGGAGAAAGCTTTGAAGCTGGCAAGAGATGTGTTTGGGAAGGTGGTCAAAAAACAGGCAATGAGAACTCTCGTTGAGCTTTGCGTTGGAACTAATGAATGA 1662 0.4422 MVGPKMMEETPKSHLGISEEYMQQLRSKATELLLREEWKECIEAYSHFIALCEDQISRTHSQSDFDQLQNLRKSLRLALSNRAEARSRLKDFHYALDDCDLALEIDSTHLKTLICKGKILLNLNMYSMALDCFRVALLDPQAGGNSENLNGYAEKCKKLDFLSRTGALDLSDWVSNGFRGKSPELAEYIGSVQIKKSEISGRGLFATRNIDAGTLILVTKAIAMERSILGGKDLSEEAQLVMWRNFIDQVSDLTRKCHRTSNLISKLSSGEDEDALDVPDIALFRPETGEIKNEQSSEYEMIDIDKLLAILDVNSLTEDAVSANVLGRKSNDYYGVGLWLLPSFINHCCCPNARRLHVGDYLIVHASKDIKAGEEITFAYFDPLSLLHKRKEMSMTWGIHCRCKRCKFESEMFCKQEIREIEIGLERGMDAGGAVFKLEEEMKRWKVRGKERAYVRASFWTAYSEVYRSERCMKRWGRRIPAMEAVVYSIIEVMGGDERLLRILMEALKKNGGGGGGLAEMEKALKLARDVFGKVVKKQAMRTLVELCVGTNE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2479 553 Gene3D SET domain 291 411 IPR046341 -
Bisa11g2479 553 ProSiteProfiles SET domain profile. 190 381 IPR001214 GO:0005515
Bisa11g2479 553 Gene3D Tetratricopeptide repeat domain 18 160 IPR011990 GO:0005515
Bisa11g2479 553 SMART tpr_5 76 109 IPR019734 GO:0005515
Bisa11g2479 553 SMART tpr_5 22 55 IPR019734 GO:0005515
Bisa11g2479 553 SMART tpr_5 110 142 IPR019734 GO:0005515
Bisa11g2479 553 Coils Coil 68 88 - -
Bisa11g2479 553 SUPERFAMILY SET domain 191 407 IPR046341 -
Bisa11g2479 553 CDD SET_SMYD 308 406 - -
Bisa11g2479 553 SMART set_7 190 387 IPR001214 GO:0005515
Bisa11g2479 553 Gene3D SET domain 190 275 IPR046341 -
Bisa11g2479 553 SUPERFAMILY TPR-like 17 137 IPR011990 GO:0005515
Bisa11g2479 553 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 18 547 - -
Bisa11g2479 553 Pfam SET domain 201 380 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2479 Bisa-ChrBisa11 49487760 49489421 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa11g2479 SET 9.4e-15 No_clan