Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2476 ATGGAGGGAAGAACAATCACGAGCTGTGGATCAATCACGAGCTCTGGACTACCCCCTGGCTTCAGGTTCCACCCAACCGACGAGGAACTAATCGTCTATTACCTCTGTAACCAAGCCACCTCCAAGCCTTGCCCTGCATCTATCATCCCTGAAGTCGATATCTATAAATCTGATCCGTGGGAACTCCCTGAGAAAGCAGAGTTTGGAGAGAATGAATGGTATTTCTTTAGCCCAAGAGACAGGAAGTACCCTAACGGGGTGAGACCAAACAGGGCCACTGTGTCTGGGTACTGGAAGGCTACAGGCACAGACAAGGCAATCTATAGTGGGGCTAAGCATATTGGGGTTAAGAAAGCTTTGGTCTTTTATCAGGGAAGGCCACCAAAGGGTATCAAGACAGATTGGATCATGCATGAATATCGCCTGATTGGATCAAAAAGACAAGCCACCAAGCATATTGGGTCCATGAGATTGGATGACTGGGTGCTGTGTAGGATCTACAAGAAGAAGCACATAGCAAAAGCAATGGAGCAAAAAGAAGTGGAATACTCGACTTCCCGGATGGACATAACAGCAGAAAATGTCAATGACAGTAGTGAACAACAAATGATGAAATTTCCAAGGACTTCTTCTCTTACTCATCTTCTGGAAATGGAAAATTACTTGGCTCCAATCTCACACCTCTTATCTGATGGATCCTATAACTCAACCTTTGACTGCCAAATTAACTCTGCTTATGCTGGAAATTACACAGACCCCTTTGTAAAACCTCAGGATTTTGAAGTGCCTAATCATTTTAGAGGATATGACCAATAA 816 0.4436 MEGRTITSCGSITSSGLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKSDPWELPEKAEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGAKHIGVKKALVFYQGRPPKGIKTDWIMHEYRLIGSKRQATKHIGSMRLDDWVLCRIYKKKHIAKAMEQKEVEYSTSRMDITAENVNDSSEQQMMKFPRTSSLTHLLEMENYLAPISHLLSDGSYNSTFDCQINSAYAGNYTDPFVKPQDFEVPNHFRGYDQ 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2476 271 FunFam NAC transcription factor 26 173 - -
Bisa11g2476 271 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Bisa11g2476 271 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Bisa11g2476 271 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 201 - -
Bisa11g2476 271 SUPERFAMILY NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Bisa11g2476 271 ProSiteProfiles NAC domain profile. 17 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2476 Bisa-ChrBisa11 49457867 49459004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2476 13 267 NAC Transcription Factor Family AT1G69490 59.470 1.07e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa11g2476 NAM 2.2e-39 No_clan