Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2468 ATGGACTCTCTCTCTCTCACCTCCATCCACCCATCTGCTTCTTGTTCTTCATCTCAACACACTTGCTATGCCTCTAATGGAAACACTAGCTTCACTTTCTTGCCCACTGCAGAGAGATCCGACTCTTGGCTAATCATCAATGGCAATAAAGTGTGTGATCACAGAAGCAGTGATGCCGCCGTTGGGGAAAGGAATGAGAGATGAAAGAGCTGTAGGCTGAGATGGTTGAACCAGCTGGATCCAAGGATAAACAGGAAGTCGTTCAGTGAAGAAGAGAAGGAGAGGCTAATGGAGGCGCAGAGAGTGTATGGGAACAAATGGGCCATGATTGCGAGGCTATTCCCAGGGAGAACTGATAATGCAGTGAAGAATCAGTGGCACGTAATTATGGCCAGAAAGTACAGAGATCAGCAATCCAGCAGGAAGAGGATGAGGCTGATGACCCTATCTGCATCAATGGAGCACCAACAAACTCTAACCTCTGAATCTGATTGCTTCCATGGTGGGGTTGAGGTTGATTGTTGTGCAGGCTTAAATGCTTCAGACTCAGTGACCCACCACTGGAAGCAGCAGGACGCCTTCTATGCTCCTCACATACCTCTTGATTCCTTCTCTACAGGGGGTAGAAGCGATGACGTGGCAGTAGGTGAGATTTCGACGGAGAATAAATACTGTGAAAGGGAAAGGCCAAGTAAAGAAGAAGATCGTCGTCGTCATCATCATAGTGAATATGATCATCTTTCTGAACTGTACGACCCAGCTCATTATCATCCATTAAAGCTTAAGGCTCACCATTTTTACAAATTCTCAAGTTCCAGTGCTTCCTCACTATCAGGCGGTGAACAATGTTCATCGTTATCGTCACCCTTTGCAGATCAAACCAGAGGTCGAGTCAGTGATCAATGTCATCACTCATTTATTGACTTTCTTGGAGCAGGAGTAGGACCATCAAATTAA 957 0.4598 MDSLSLTSIHPSASCSSSQHTCYASNGNTSFTFLPTAERSDSWLIINGNKVCDHRSSDAAVGERNERXKSCRLRWLNQLDPRINRKSFSEEEKERLMEAQRVYGNKWAMIARLFPGRTDNAVKNQWHVIMARKYRDQQSSRKRMRLMTLSASMEHQQTLTSESDCFHGGVEVDCCAGLNASDSVTHHWKQQDAFYAPHIPLDSFSTGGRSDDVAVGEISTENKYCERERPSKEEDRRRHHHSEYDHLSELYDPAHYHPLKLKAHHFYKFSSSSASSLSGGEQCSSLSSPFADQTRGRVSDQCHHSFIDFLGAGVGPSN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2468 318 Gene3D - 86 158 - -
Bisa11g2468 318 PANTHER MYB PROTEIN-RELATED 64 163 - -
Bisa11g2468 318 MobiDBLite consensus disorder prediction 217 241 - -
Bisa11g2468 318 Pfam Myb-like DNA-binding domain 85 128 IPR001005 -
Bisa11g2468 318 CDD SANT 87 127 IPR001005 -
Bisa11g2468 318 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Bisa11g2468 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Bisa11g2468 318 SUPERFAMILY Homeodomain-like 68 137 IPR009057 -
Bisa11g2468 318 SMART sant 84 132 IPR001005 -
Bisa11g2468 318 MobiDBLite consensus disorder prediction 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2468 Bisa-ChrBisa11 49359017 49362698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2468 69 148 MYB Transcription Factor Family AT1G69560 76.250 7.76e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa11g2468 Myb_DNA-binding 6e-12 CL0123