Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2466 ATGTCGGAGGTTAAGGACCCGGCGATAAAGCTGTTTGGGAGGACGATTTCCTTCCCACTCGACCCCTGTCTCTTCCCCAACGACTCTTCTGGACCTCCTCCTCCGGATGACCCTACTCTTCCTTCTTCGTCTTTGTCTGAAGAATACACCTCCGAAAGAGATCAGGAACCATCAAGGAAAGAAGTCACCTCAGAACAAGATGATGGTGCTTCACATCATACCACAGAGGATTTAAAATCTCCCACATGTTCTGGAGTTTCTGAGAAACCCAAGACTCCCTCTTCCTCAGCAGAAACAGACACTTCTCTACTGAAACCCTCTGAAGATGGACAACAAAGTGAGACAAGTACAGTGCAAGAAGAAGCTCCGAAGAAACCTGACAAGATACTTCGATGCCCTCGATGCAATAGCATGGACACCAAATTCTGTTATTATAACAATTACAATGTAAATCAGCCCCGCCATTTCTGTAAAAACTGCCAGAGATACTGGACTGCAGGAGGAACCATGAGAAATGTGCCTGTAGGTGCTGGTCGCCGCAAGAACAAAAGCCCTTGTGCATCACATTATCGTCACATGATGGTTCCTGAGTCCCTTCTTATGGCTAAAACCAATGCTGCCAATGGATTACACAACACTGTTGTGGGAAACGGAGCAACTGTCTTGACCTTTGGCTCAGGTTCTCCTATATGTGATCCCATGGCTTCTGTATTGAACCTTGCTGGGAAAACCCAAAATGGTGCTTTAAATGGGTTTCATGCACCTGAGCAGAATATTATTGTTTCTTGTGGTAGAGAGGATAATATTAACAGGGATGATAACTCAAATGGAGCTTCTGTAACAACTTCAACTTCATCAGAGAAGAGGACCAATGCTAGTTCACAAGAATCAGTGGATAAAAGTTATGAAGCCTTCCCTCCTCAATTACAATGCATCCCAGGTTCCCCATGGCATTATCCATGGAACCCGATGCAGTTGAGTTCTTCCATGCTACCTCCTGTATTTTGCCCGCCAGGCTATCCAGTGTCTATCTATCCCACACCGGCATATTGGGGTTGTGCCTTACCAGCTTCCTGGAATATACCATGTATTTCTCCACAAGCTTCTGCGAATCACTCTTCCCCTAGCTTTGGCTCTAATTCACCTACCTTAGGGAAGCACTCAAGGGATGGGAGCATCCTCACTCCAGCGAACTCTCAGAAAGAAAGGCCTGATATAGAGAGTAAGAACTCAGGAAATGGTGTTTTGATCCCCAAGACACTGAGAATTGATGATCCCAGTGAGGCTGCAAAGAGTTCTATATGGTCAACATTAGGGATCAAAAATGAAAAGGCCAATTCTCTCAATGGTGGAGGAAGAGATAGCCTTTTCAAGGCATTTCTATCTAGGGGTGATGATAAGAATCATCATCATCTGGTTGAGGCATCACCGGTGCTGCAAGCCAACCCGGCAGCTTTGGCACGGTCTGTTGCCTTCCAAGAGCAGCAGACCTAA 1494 0.4592 MSEVKDPAIKLFGRTISFPLDPCLFPNDSSGPPPPDDPTLPSSSLSEEYTSERDQEPSRKEVTSEQDDGASHHTTEDLKSPTCSGVSEKPKTPSSSAETDTSLLKPSEDGQQSETSTVQEEAPKKPDKILRCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSPCASHYRHMMVPESLLMAKTNAANGLHNTVVGNGATVLTFGSGSPICDPMASVLNLAGKTQNGALNGFHAPEQNIIVSCGREDNINRDDNSNGASVTTSTSSEKRTNASSQESVDKSYEAFPPQLQCIPGSPWHYPWNPMQLSSSMLPPVFCPPGYPVSIYPTPAYWGCALPASWNIPCISPQASANHSSPSFGSNSPTLGKHSRDGSILTPANSQKERPDIESKNSGNGVLIPKTLRIDDPSEAAKSSIWSTLGIKNEKANSLNGGGRDSLFKAFLSRGDDKNHHHLVEASPVLQANPAALARSVAFQEQQT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2466 497 MobiDBLite consensus disorder prediction 49 75 - -
Bisa11g2466 497 ProSitePatterns Zinc finger Dof-type signature. 132 168 IPR003851 GO:0003677|GO:0006355
Bisa11g2466 497 Pfam Dof domain, zinc finger 127 184 IPR003851 GO:0003677|GO:0006355
Bisa11g2466 497 MobiDBLite consensus disorder prediction 76 119 - -
Bisa11g2466 497 MobiDBLite consensus disorder prediction 16 130 - -
Bisa11g2466 497 MobiDBLite consensus disorder prediction 273 300 - -
Bisa11g2466 497 MobiDBLite consensus disorder prediction 270 300 - -
Bisa11g2466 497 ProSiteProfiles Zinc finger Dof-type profile. 130 184 IPR003851 GO:0003677|GO:0006355
Bisa11g2466 497 PANTHER CYCLIC DOF FACTOR 2 1 495 IPR045174 GO:0003700|GO:0006355
Bisa11g2466 497 MobiDBLite consensus disorder prediction 370 418 - -
Bisa11g2466 497 MobiDBLite consensus disorder prediction 26 40 - -
Bisa11g2466 497 MobiDBLite consensus disorder prediction 370 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2466 Bisa-ChrBisa11 49343678 49346468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2466 1 495 C2C2-Dof Transcription Factor Family AT3G47500 41.051 4.21e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa11g2466 zf-Dof 3.9e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2466 11 49343678 49346468 Bisa08g1816 08 43272015 43274086 CCT