Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2465 ATGGATCTGCAAAATATGCAAAACCACAGCATGCATTTGGTTCTGTCCTCTGATGCCAAGCCAAGGCTCAAATGGACTCCTGAGCTTCACCAACGTTTCCTAGAGGCTGTTCATCAGCTTGGAGGGGCAGAAAAGGCAACTCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTTACCTTGTACCACTTGAAGAGCCATTTACAGAAATTCAGACTTGGGAAAAGTCCACTGCCAGAAGCCTTTTATGATGATAAACAAGAAGATTATAGAGAAATCCATAGCAGCGATGGCAATTGCAGCAGGGAAACCAGTGTGGGGACCCCGAATCAGATGACTGAAAGCCAGCAGATTTCTCAAGCTCTCCAAATTCAAATGGAAGTTCAGAGGAAGCTTTATGAACAAATTGAGGTGCAGAGGCATTTGCAGCTTCGGATTGAAGCTCAAGGGAAGTACTTACAATCAGTTCTAATGAAAGCTCGGGAAGCACTTTCTGGGTACAGTTCTTCTGCTGCTGGAATAGAGCTTGCAAAAGCTGAGCTCTCTTTAGTCTCAATAATCAACAATGGCTGCCCAAGTTCCCCCATCTCAGAACTCACGGAAACAAGAGCGTTGAGTTTGAACGATGGAGAGAGGAAGCAAAACAGAGGGACTATGTGTTCATTGGAGAGTTCCTTGACATCTTCAGAAAGCTCAGGGAGGAAGGAAGAGGACCCTCAAAACTCTAATAGAACTTCAGTTGAACTGCAGTTGATGACTAGTCACCCAGAAGATGATAAAGCATTGAATGGTGACACAAAGATTCAAGCTTGTGGGAGAAAGAGGAGTGGTGCCACTGATTCTGATGGTTACTGCGTTGAGCAACCAATCAGTAAAAGATGTAATAAGAGGAAATCTGAAACGCTTGACTTGAACAGACAATATCACAGTGACATTGACACAGACTTATACTTGAAATGCAGTTCATTGACCAGTTCTAGCTTTTAG 990 0.4394 MDLQNMQNHSMHLVLSSDAKPRLKWTPELHQRFLEAVHQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKFRLGKSPLPEAFYDDKQEDYREIHSSDGNCSRETSVGTPNQMTESQQISQALQIQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLMKAREALSGYSSSAAGIELAKAELSLVSIINNGCPSSPISELTETRALSLNDGERKQNRGTMCSLESSLTSSESSGRKEEDPQNSNRTSVELQLMTSHPEDDKALNGDTKIQACGRKRSGATDSDGYCVEQPISKRCNKRKSETLDLNRQYHSDIDTDLYLKCSSLTSSSF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2465 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 255 IPR044848 GO:0003700
Bisa11g2465 329 Gene3D - 19 77 - -
Bisa11g2465 329 Pfam MYB-CC type transfactor, LHEQLE motif 118 163 IPR025756 -
Bisa11g2465 329 MobiDBLite consensus disorder prediction 212 230 - -
Bisa11g2465 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Bisa11g2465 329 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Bisa11g2465 329 FunFam Myb family transcription factor 19 77 - -
Bisa11g2465 329 Pfam Myb-like DNA-binding domain 22 71 IPR001005 -
Bisa11g2465 329 MobiDBLite consensus disorder prediction 208 246 - -
Bisa11g2465 329 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2465 Bisa-ChrBisa11 49324124 49325544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2465 6 294 G2-like Transcription Factor Family AT1G69580 51.792 6.14e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa11g2465 Myb_DNA-binding 1.3e-07 CL0123