Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2463 ATGGCTTCTGAACCCGATTTGTCCGAGATTTCGTCTCTGTTCGAAAGGTTGGTGAGAAACAGAGACCTGTCTCTGTTCCTTCCCTTCATCTTCGGTTTCTCAAACGATGCTTCCAGAAGAGACAGTGATGCCCCAGTTCAGGAAAATGAGGATGAAGAAAGTACTCGTCGTGAAAGGATCATCTTGATCAACCCCTTTACTCAGGGCATGGTGGTGATCGACGGTGCTTCGAGCCTTGAGACTCTGTTTCGCGAATTAGGAAATGGCAAGAGTGGGCAACCCCCGGCTTCAAAAGAATCTATAGACGCCATGCCCGGTGTTGAAATCGAGGAAGGGGAAGATGGGGAGTGTGTCATTTGCTTGGAGGAATGGGAGATTGGTGGGGTGGTGAAGGAGATGCCTTGTAAGCATAAATTTCACCCAAATTGTATAGAGAAGTGGTTGGGGATTCATGGGTCTTGCCCTGTTTGCAGGTATCAGATGCCTATTAATGAAGAAGATGTGGGGAAGAAGAGAGATGATGAAGAAGGAGGAGGAGGACAGAGGAGTAGGAGGGTTGGGAGAGAAGTTTGGGTTAGTTTCTCTTTGAATAGTGATAGGAGGAGAAGTGAGGATTCAAATCAAGCCTCTTCAGGTGATTCTGATGATTCTTCTTCAAGTCCAAGAAATGATGCTGAGCAATTAGATAGTTAG 693 0.4646 MASEPDLSEISSLFERLVRNRDLSLFLPFIFGFSNDASRRDSDAPVQENEDEESTRRERIILINPFTQGMVVIDGASSLETLFRELGNGKSGQPPASKESIDAMPGVEIEEGEDGECVICLEEWEIGGVVKEMPCKHKFHPNCIEKWLGIHGSCPVCRYQMPINEEDVGKKRDDEEGGGGQRSRRVGREVWVSFSLNSDRRRSEDSNQASSGDSDDSSSSPRNDAEQLDS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2463 230 MobiDBLite consensus disorder prediction 197 230 - -
Bisa11g2463 230 Pfam Ring finger domain 116 158 IPR001841 -
Bisa11g2463 230 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Bisa11g2463 230 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 44 162 - -
Bisa11g2463 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 164 IPR013083 -
Bisa11g2463 230 SMART ring_2 117 157 IPR001841 -
Bisa11g2463 230 FunFam E3 ubiquitin-protein ligase RNF181 85 164 - -
Bisa11g2463 230 SUPERFAMILY RING/U-box 104 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2463 Bisa-ChrBisa11 49319634 49320326 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2463 1 215 C3H Transcription Factor Family AT1G26800 52.511 4.50e-71 214