Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2458 ATGGCACCGGTAGTGGGTGGGTGGGAAGGCTGGAATGTTTTGGAGCGAGAGGGGTCTCCAAAACCTTTTAAGGTCTCTACAAATTCTCTTCCAAACCCTCGTTCTCCAATCAGTGGCTGCACAAGTTCTTCTTCTCATGCCTCCCGTCTTTGCAATTCCTTTCCATCATTCTTACCTGCCTGCCACACTCATTTTCTGTTGGTGAGAAACAGAGACGAGTCTCGGTTCCTTCCCTTCATCTTCGGCTTGTCAAACGATGCTTCCAGAACAGAGAGTGATGACCCAGTTCAGGAAAATGAGTATGAAGAAAGTACTCGCCGTGAAAGGGCTTCGAGCCTTGGGACTCTGTTTCGCGAATTGGGAAATGGCAAGAGTGGGCAACCCCCGGCTTCAAAGGAATCTATAGATGCCATGCTCAGCGTTGAAATGAAGGAAGGGGACGATGGGTACTGTGTCTTTTGCTTGGAGGAGTGGGAGATTGGTGGGGTGGTGAAGGAGATGCCTTGTAAGCATAAATTTCACCCAAAATGTATAGAGTTCTGGTTGGGGATTCATGGGTCTTACCCTGTTTGCAGGTATCAGATGCCTATGCGGAGTTAA 600 0.4867 MAPVVGGWEGWNVLEREGSPKPFKVSTNSLPNPRSPISGCTSSSSHASRLCNSFPSFLPACHTHFLLVRNRDESRFLPFIFGLSNDASRTESDDPVQENEYEESTRRERASSLGTLFRELGNGKSGQPPASKESIDAMLSVEMKEGDDGYCVFCLEEWEIGGVVKEMPCKHKFHPKCIEFWLGIHGSYPVCRYQMPMRS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2458 199 SUPERFAMILY RING/U-box 134 196 - -
Bisa11g2458 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 198 IPR013083 -
Bisa11g2458 199 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 92 196 - -
Bisa11g2458 199 Pfam Ring finger domain 151 192 IPR001841 -
Bisa11g2458 199 ProSiteProfiles Zinc finger RING-type profile. 151 192 IPR001841 -
Bisa11g2458 199 MobiDBLite consensus disorder prediction 88 109 - -
Bisa11g2458 199 FunFam E3 ubiquitin-protein ligase RNF181 119 198 - -
Bisa11g2458 199 MobiDBLite consensus disorder prediction 91 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2458 Bisa-ChrBisa11 49253368 49254106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2458 67 197 C3H Transcription Factor Family AT1G26800 47.518 2.80e-34 119