Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2446 ATGGACTTCACCACTTCCACCACCACACACACATCACATACAGATACTCCTACCCGACCCACCAACGGCTCCATCAAGCACCACCTACCCCCCGCCGCTCCTCCTGCTGCGGCGAAGATTCCCATGGTGGTTTCCTCCGCCTACAAGGAATGCCTCAAGAACCACGCCGCCACCATCGGCGGCCACGCGCTCGACGGCTGCGGCGAGTTCATGCCCTCACCCACCGCCACCCCCACCGACCCCCGCTCGCTAAAATGCGCCGCCTGCGGTTGCCACCGGAACTTCCACCGCCGCGACCCACAACCAGACCCCCCCAACCTCCTCGCCCGCTTGTACTCGCCGCCGCCCCCCACTCAAGCTCTCCGGGGACTAAGCACAAGCACCAGCACGAGCCCAAGCCCGAGCCCGAGCCCAAGCCCGATGTCGAGCCCGAGCCCGCCTCCGCTCTCGCATTTCCCGCCTTCCTCCTACCACTCGTCGGGAGTAGTCCCCCACATGCTCTTAGCGCTCGGGACGGGGTTCTCGGGACTGTCGGATGAGCAGCACCGGGGGTTCAATTCTATGGCGGCGAAGACGGCGAAGGTGGAGAGAGAAAACCCGAGCGGGAAAAAGAGATGCAGAACGAAGTTCAGCCCGGAGCAGAAGGAGAAGATGCGTTTGTTTTCCGAGAAACTGGGGTGGAAACTGCACAAGGGAGACGATAGGTCGGTTAAGGAATTCTGCGACGAGATTGGCGTTTCGAGAGCGGTGTTCAAGGTTTGGATGCACAATAACAAGAACACCTTCAGATTGAAGAGAACAGAGACTGGAGCGGATGTTGATGCAGGAAATGATCACAAAGTAAATGGGGATGATGATCATAATAATAATAATAATGTCATGAATGGTGGTGGGTTTCAGAGTGATATCAACAAGAATCCTTTTATTGACAACGAAGGTGAATGTGTTGATCTTCATGCTAATGGGTCTTCGTCTTCTTAA 981 0.5668 MDFTTSTTTHTSHTDTPTRPTNGSIKHHLPPAAPPAAAKIPMVVSSAYKECLKNHAATIGGHALDGCGEFMPSPTATPTDPRSLKCAACGCHRNFHRRDPQPDPPNLLARLYSPPPPTQALRGLSTSTSTSPSPSPSPSPMSSPSPPPLSHFPPSSYHSSGVVPHMLLALGTGFSGLSDEQHRGFNSMAAKTAKVERENPSGKKRCRTKFSPEQKEKMRLFSEKLGWKLHKGDDRSVKEFCDEIGVSRAVFKVWMHNNKNTFRLKRTETGADVDAGNDHKVNGDDDHNNNNNVMNGGGFQSDINKNPFIDNEGECVDLHANGSSSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2446 326 Pfam ZF-HD protein dimerisation region 47 100 IPR006456 -
Bisa11g2446 326 NCBIfam homeobox domain, ZF-HD class 203 260 IPR006455 -
Bisa11g2446 326 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 27 261 - -
Bisa11g2446 326 MobiDBLite consensus disorder prediction 96 156 - -
Bisa11g2446 326 Gene3D - 188 263 - -
Bisa11g2446 326 MobiDBLite consensus disorder prediction 1 34 - -
Bisa11g2446 326 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 48 99 IPR006456 -
Bisa11g2446 326 SUPERFAMILY Homeodomain-like 198 263 IPR009057 -
Bisa11g2446 326 MobiDBLite consensus disorder prediction 1 23 - -
Bisa11g2446 326 MobiDBLite consensus disorder prediction 133 153 - -
Bisa11g2446 326 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 48 99 IPR006456 -
Bisa11g2446 326 FunFam Zinc-finger homeodomain protein 2 190 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2446 Bisa-ChrBisa11 49147492 49148472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2446 47 270 ZF-HD Transcription Factor Family AT1G69600 49.130 7.45e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa11g2446 ZF-HD_dimer 2.4e-28 No_clan