Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2441 ATGGAAGAGAGAGGTGAGTCTGAGAAGCTTGATGAAGTAATGCTCCCAGGGTTCAGGTTTCACCCCACTGACGAGGAGCTTGTAGGGTTTTATCTCAAGAGAAAGATTCAGCAGCGACCCCTCTCTATCGAGCTCATCAAGCAGCTTGATATCTACAAGTACGATCCATGGGATCTTCCAAGTAAGTCATCACTATTCACTACACTTACTCTTATCGACTCATGGGCAATCTGCAGAATATTCAAGAAAACCAACTCTACAGCTCAAAGAGCTCTCTCTCACTCCTGGGTCTCTCCCTTACCTGAAACCAACGCTTCTCATCATCACCATGAGATGCTAACCAAAGATGAAGACCCTACCCAGTTTTGTTTAGACTCACTGACAAAGAAAACTAGCTTAGCCAACCAGTTCTGCACTAACCAAAACGACCACTTAACCCCCACCACCAGTACTTCTACTAGTAGTAATACTCTCTGTCCTTTAGATGTGGCCTCCTTCAAGCCCATCATAAACCCATTATTGCTTTACAAGCCCTTTGACCAACTACCCGTTATTTCAAACAATGGAGACCTCACGTTTTCGTCATCCCCTCTTGAACCACCCACTGCTAAACCCACCACCATGGACGTTTCTTCCATGTTACTGAGCATGTCATCTTCCATGCTTGGAGATTTTGGCTCCAAGACCTCATCAGAGGGTGCAACTTTCGGAGGGTTTCAAGAGCAGTATGGCAGTAACAATCATGGGTATTCAGTAGGGTTACCGTTGATGCCAGAAGGGAATGGGTTAGTGAAGATGAATCATCATGGGCATGGTAATGTGAATGTGGTGGTGGATCATGGGCAAGATCAGATGGAGAGAGTAAGATCTGATAGTAATAATAATAATAGTAATATGAATGGGTTTGCATTAAGTGGCATGCCTAATTTGAATATTGGGGATGCATGGAAGTCAAACCTGCTTTGGGATAGTTCATCTTGTCCTTGTGATCATGTGCCCTCAACTTATTCCACAACCAAGTGCTATACTTAA 1032 0.4409 MEERGESEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPSKSSLFTTLTLIDSWAICRIFKKTNSTAQRALSHSWVSPLPETNASHHHHEMLTKDEDPTQFCLDSLTKKTSLANQFCTNQNDHLTPTTSTSTSSNTLCPLDVASFKPIINPLLLYKPFDQLPVISNNGDLTFSSSPLEPPTAKPTTMDVSSMLLSMSSSMLGDFGSKTSSEGATFGGFQEQYGSNNHGYSVGLPLMPEGNGLVKMNHHGHGNVNVVVDHGQDQMERVRSDSNNNNSNMNGFALSGMPNLNIGDAWKSNLLWDSSSCPCDHVPSTYSTTKCYT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2441 343 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Bisa11g2441 343 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 64 - -
Bisa11g2441 343 SUPERFAMILY NAC domain 13 63 IPR036093 GO:0003677|GO:0006355
Bisa11g2441 343 Gene3D NAC domain 23 70 IPR036093 GO:0003677|GO:0006355
Bisa11g2441 343 Pfam No apical meristem (NAM) protein 16 64 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2441 Bisa-ChrBisa11 49115351 49116880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2441 8 60 NAC Transcription Factor Family AT1G26870 81.132 2.20e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa11g2441 NAM 1.9e-13 No_clan