Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2432 ATGGAAGCAGCAGATCATCCACATGGCATTCGCAGGCCCAATTTCCCATTGCAACTCTTGGAGAAAAACCATCATCAACCTCAACCTTCCGCGTCAGCCACCGTCGCCGGCGACGACTCCGCCAGACCCAAATCCGAGCAATCCTCCGACCCTCCCAAGAAGCCGGCTGCGAAGCGGACCTCCACCAAGGACCGCCACACCAAGGTCGACGGCCGTGGCCGCCGGATCCGCATGCCGGCCACCTGTGCTGCCAGGGTTTTTCAGCTGACCAGAGAGCTCGGCCACAAGTCCGACGGAGAAACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCCTCGGTGATCGCTGCCACCGGCACCGGCACAATTCCCGCCAATTTCACCTCCCTCAACATCTCGCTCCGCAGCTCCGGTTCCAGCATGTCGGCGCCGTCGCACTACTTCCGAGGTAATTACTTCAGCTCCAACTTTTCGGCGGCTGCGATGGCTGCGGCTTCCCAGTTGAGGAGTCGGAGCGAGTGGGAGAGGAACATGGTTGTTGAAGATTCTAGAAGGATCTTGTTCCCCAGCGCCGTCGTCGGTGTATCTTCCGCAGAGAACAATTCTCCGGGTTTGAACTTCAGCAACGTGAATGCTAATATTTCCCAAGCCAAACCAGAGCTCCGGGAAGCAGCAGCCAGTGGCAGCCTCGAATTGACGACCACGACGAGGACAACGACAGAGGATTCCGATCAGGGCAGTTTAGGAAGAAAGAGAAGACCAGAGCAAGAACTGTCCCAAACTCAGATGGGTAGTTATTTGTTACAATCGAGCGCCGGCTCGATTCCGGCGAGTCATGCTTCCATTCCGGCAACGTTCTGGGCGATGAGTAACGGGGGAGGCGGCGGCAGTAACGGAGCGGATCCCTTATGGGCAATTCCGTCTAATAATAGTAATATGTATAGGGGGGCGTTGTCAGATGGTGGGATTCACTTCATGAACTTTGCAGCTTCTCCATTAATGCCTCTAATGGCTGCAGGCCAACAATTAGGTTCAGCCAACGGCACTACAATGGTCCCTGAAAGCAACTTAGGCATGCTCGCAGCGCTTAACGCATATCGGCCGGTCAGGGCTAACGGCTTGTCGGAGACCACGACGGCGGTGGCGAGCAACCAGCAACGTTCAGATGACGGGGGAGATCATGAGGGACATGAAAGACATTCCTGA 1203 0.5653 MEAADHPHGIRRPNFPLQLLEKNHHQPQPSASATVAGDDSARPKSEQSSDPPKKPAAKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSAPSHYFRGNYFSSNFSAAAMAAASQLRSRSEWERNMVVEDSRRILFPSAVVGVSSAENNSPGLNFSNVNANISQAKPELREAAASGSLELTTTTRTTTEDSDQGSLGRKRRPEQELSQTQMGSYLLQSSAGSIPASHASIPATFWAMSNGGGGGSNGADPLWAIPSNNSNMYRGALSDGGIHFMNFAASPLMPLMAAGQQLGSANGTTMVPESNLGMLAALNAYRPVRANGLSETTTAVASNQQRSDDGGDHEGHERHS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2432 400 ProSiteProfiles TCP domain profile. 62 116 IPR017887 -
Bisa11g2432 400 MobiDBLite consensus disorder prediction 43 75 - -
Bisa11g2432 400 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 359 IPR005333 GO:0003700
Bisa11g2432 400 MobiDBLite consensus disorder prediction 21 35 - -
Bisa11g2432 400 MobiDBLite consensus disorder prediction 1 77 - -
Bisa11g2432 400 MobiDBLite consensus disorder prediction 227 242 - -
Bisa11g2432 400 Pfam TCP family transcription factor 60 262 IPR017887 -
Bisa11g2432 400 MobiDBLite consensus disorder prediction 219 261 - -
Bisa11g2432 400 MobiDBLite consensus disorder prediction 373 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2432 Bisa-ChrBisa11 48978331 48979533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2432 255 397 TCP Transcription Factor Family AT1G69690 35.443 5.66e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa11g2432 TCP 1.7e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2432 11 48978331 48979533 Bisa11g2432 11 48978331 48979533 ECH