Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2429 ATGGTTCACGTATCCTTCTACAGGAACTATGGGAAAACCTTCAAGCAGCCTCGGCGTCCGTACGAGAAGGAGCGTCTGGACCATGAGCTGAAGCTGGTCGGAGAGTATGAGCTTCGTTGCAAGAGGGAGCTGTGGAGGGTTCAGTACGCTCTGAGCCGGATTCGTAATGCCGCTAGAATGCTTCTCACCCTCGACGAGAAGAACCCACGTCGTATCTTCGAAGGTGAAGCTCTTTTGAGGAGGATGAACAGGTATGGCCTCCTCGACGAGAGCCAGAACAAACTCGATTATGTCTTGGCTCTCACTGTCGAGAACTTCCTCGAGCGCCGGCTTCCAGACTCTGGTCTTCAAGTCTGGCACGGCCAAGTCAATCAACCACGCCAGAGTTTTGATTAG 396 0.5303 MVHVSFYRNYGKTFKQPRRPYEKERLDHELKLVGEYELRCKRELWRVQYALSRIRNAARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLPDSGLQVWHGQVNQPRQSFD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2429 131 Pfam Ribosomal protein S4/S9 N-terminal domain 8 108 IPR001912 GO:0019843
Bisa11g2429 131 SMART Ribosomal_S4_2 8 108 IPR001912 GO:0019843
Bisa11g2429 131 PANTHER 30S 40S RIBOSOMAL PROTEIN 8 112 IPR022801 GO:0003735|GO:0015935|GO:0019843
Bisa11g2429 131 NCBIfam 30S ribosomal protein S4 11 111 IPR005710 GO:0003735|GO:0006412|GO:0015935
Bisa11g2429 131 SUPERFAMILY Alpha-L RNA-binding motif 12 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2429 Bisa-ChrBisa11 48956487 48956995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2429 1 111 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 92.793 1.75e-70 208