Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2425 ATGTTGAGCTCTAGATTTCGATTTTGGACCAGGGGTTGCATTTGTTTGGTCCTTATTTCTGCAATTTCTGGTGCTTTATCTCTGGAACCCGAATTAGGATCGACCCGTGTCGTCTTTCAGACGAATTACGGGGATATTGAATTTGGTTTCTTTCCCACTGTGGCACCCAAAACCGTTGATCACATTTTCAAACTAGTGCGACTTGGATGCTATAATACGAATCATATCTTTCGGGTAGATAAGGGCTTCGTGGCCCAAGTAGCAGATGTTGTAGGAGGAAGATCTGCCCCTATGAATGAAGAGCAAAGAAAAGATGCCGAAAAGACTGTTGTTGGTGAATTTAGCCAGGTCAAACATGTTAGAGGTATTCTTTCTATGGGAAGGTATAGTGATCCTGACAGTGGTGGATCCTCATTTTCAATGCTTCTGGGAGATGCTCCTCATCTTGATGGCCAGTATGCAATATTTGGAAGAGTCACTAAAGGTGATGATACATTGAAAAAGCTCGAGCAACTACCTACTCGTAAAGAGGGCATGTTCGTAATGCCAACGGAGCGTATCACTATTCTGTCATCTTATTATTATGACACTGAGAGTGAGGATTGTGAAAGAGACAGATCAATTTTAAAGCGCAAGCTTTCTGCTTCAGCTGTTGAAATTGAAAGACAGAGGATGAAATGCTTCCCCTGA 690 0.4232 MLSSRFRFWTRGCICLVLISAISGALSLEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGCYNTNHIFRVDKGFVAQVADVVGGRSAPMNEEQRKDAEKTVVGEFSQVKHVRGILSMGRYSDPDSGGSSFSMLLGDAPHLDGQYAIFGRVTKGDDTLKKLEQLPTRKEGMFVMPTERITILSSYYYDTESEDCERDRSILKRKLSASAVEIERQRMKCFP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2425 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Bisa11g2425 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 IPR002130 GO:0000413|GO:0003755
Bisa11g2425 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 IPR002130 GO:0000413|GO:0003755
Bisa11g2425 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 191 IPR002130 GO:0000413|GO:0003755
Bisa11g2425 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 38 194 IPR002130 GO:0000413|GO:0003755
Bisa11g2425 229 SUPERFAMILY Cyclophilin-like 36 198 IPR029000 -
Bisa11g2425 229 Gene3D - 26 203 IPR029000 -
Bisa11g2425 229 CDD cyclophilin 38 191 - -
Bisa11g2425 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 10 229 IPR044233 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2425 Bisa-ChrBisa11 48884186 48888584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2425 37 192 U-box Gene Family AT5G67530 29.268 9.37e-11 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2425 11 48884186 48888584 Bisa11g2425 11 48884186 48888584 ECH