Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2424 ATGTCTTCCAGAAGATCCTCCCGTTCCAGACAATCCGGTTCTGCTTCCTCTGAGATCTCCGAAGCTCAGATCAATGAACTTGTCTCCAAGCTTCAGCAACTCATCCCTGAGCTCCGTGCCACTCGCTTCCACAAGGTTTCGGCTTCTAAGGTGTTACAGGAGACTTGCGACTACATCAAGAGCTTGCACAGGGAAGTAGATGATCTGAGTGAGAGACTATCTCAGCTCTTGGCCAACACTGACGCCAACAGTGCTCAAGCTGCCATTATTAGGAGCTTGCTTATGTAA 288 0.4931 MSSRRSSRSRQSGSASSEISEAQINELVSKLQQLIPELRATRFHKVSASKVLQETCDYIKSLHREVDDLSERLSQLLANTDANSAQAAIIRSLLM 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2424 95 Pfam Helix-loop-helix DNA-binding domain 23 63 IPR011598 GO:0046983
Bisa11g2424 95 CDD bHLH_AtPRE_like 19 79 - -
Bisa11g2424 95 MobiDBLite consensus disorder prediction 1 20 - -
Bisa11g2424 95 Coils Coil 59 79 - -
Bisa11g2424 95 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 8 62 IPR011598 GO:0046983
Bisa11g2424 95 PANTHER TRANSCRIPTION FACTOR PRE 1 95 IPR044293 GO:0006355|GO:0040008|GO:0046983
Bisa11g2424 95 FunFam Transcription factor ILI6 8 91 - -
Bisa11g2424 95 Gene3D - 4 91 IPR036638 GO:0046983
Bisa11g2424 95 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 23 85 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2424 Bisa-ChrBisa11 48838495 48839282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2424 19 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 71.429 1.02e-31 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2424 HLH 8.2e-07 No_clan