LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g2413	ATGAAAGTTTTCTGGGTTTCTTTCTTGTGCTTGTACCCTGCAATCATTCTTGTTCTGCTCTGTCCAATTTCAAGAGCGCAGTTATCCTCAAGCGAGACAAGAATTCTTCTCCAGGTTCAAAGGTATCTTGAGTATCCTCAGGTTCTTCAAGGATGGAGGAGCTGGACCAGTTTCTGCTATCTCCCTCCCTCACCTTCTCTCAGGATTGTCTGCTCCAAAAACCACGTGACCGAATTAACCATCGTTGGAAATAAGGTCTCGTCATCTGCTCAGACTCTTTCAGCAAGGTTCTCCATTGATTCTTTCTTCACTGTCTTGACAAAGCTTTCAAGTCTGAAGGTACTGTCTTTAGTTTCTTTGGGTCTGTGGGGTCCTTTACCATCCAAGATAGACAGGTTCTGGTCAATTGAAGTGCTTAACATCAGCTCAAATTTCATTTCTGGGGAAATCCCATCTTCAATCTCTTCTCTGAAAAATCTCAGGTGTCTGGTTTTGGCTGATAATTTGTTCAATGGGAGTATCCCAGATCTGGAACCACTAGCTTCTCTTGAAGAGCTCAATCTGGCTGACAACACACTGGGTCATGAATTCCCTTCACTGGGGAACAATCTTGTGAGAATTGTCCTGAAAAACAATTCTCTGAGATTTCGGATTCCACCCCAACTCATGCATTTTCATAATCTTCAAGAATTTGACTTATCTTCCAATGATGTTTTTGGAACCATCCCATCCTCTCTGTTCTCTCTGCCTTCCATTTTCTACATAAACTTGGCAGAAAACCATCTCACTGGTGTCTTCTCTGTGAACACAATCTGTAATTCTGCTCTAACATTTGTGGACGTCTCAGACAATCTTCTGATGGGAAATTTTCCACCTTGTATTGGATCAAAGTCCTCAAATCGCACTGTATTGTATTCTGGGAATTGTTTTTCAACCAGAACCTATAATGGACAGAACCAACACCCATTTACATATTGCAAGAAGGAGAAGGCATTAGCCGTTGAGCCTATAGAGAGAAGCCAGAAGGAGAAGTCAGGCATGAAACTAGTTGCAGTGCTTGGAGTTATTGGAGGTTCTCTTGGACTTGCAGTGCTTCTGTCACTGCTTATTCTGTTCATCTGGAAGAAGCGCAAAGCTGAAAGAGAAGATGGCAAGAATTTAGACAGATCTGCTGCTCATAATCCCCCAAGATTAAGTACTAACGCAAGACGTATTCCTCAGACGAGGAGGCTATCTGCAGTTGGACTCCCACCATACCGAATTTTCCCATTAGAGGAAATGGAAGACGCTACAAACAACTTTGACCCATCAAATCTAATAGCAGAAAGACCTCAGGGACAGCTGTATAAAGGCTGGCTCAGAGATGGTTCAGTGGTCCTGGTCAACTGTGTAGAAGTAGTGCAGAAGAACTTGCCCCAAAGCTTCATGCAATACATGGAGGTATTGCCCAATTTGAGGCATAGGCATTTGGTGAGTGTGCTAGGACACTGTGTCGTTTCTTCTCAGGACCATCCCCAACCTACAAGCACAGTCTTCATTGTCTCTGAGTACTTTTCAAATGGGTCATTGAGGGATCACCTTACAGATTTGAGAAGGAACCAAATACTGAAATGGCCACAAAGAATGGCAATCACCATAGGCATTGCAAAAGGGACCCAGTTCTTACACACAGGAGTTGTTCCTGGAATATTTGGCAATGACTTAAAGATTGAGAACATTTTGCTGGATGACAGTCTCAACCCAAAAGTTGGTGGATATAAAATTCCTTTGCCATATAAGAATGGTTTTGATAGCACATTTTGTGTGCAAAGTACTCCCACTCACGTTGGCAGAATGGATGAAGCAGAAAAGGAAGATATCTATCAGCTGGGTGTCATTCTACTTGAAGTTATCACTGGCAAACGAATTACATCTGCCAGTGAAATAGAAGAGCTGAAGGATGAGCTAGAGAGAGGTTTATCAGAGGTAGATTCAATACGCAGAAGTGCGGTAGATCCATCCATCCAGGGCACTTATGCATATGAATCACTGACAACTGCAGTTCAGATCACTATCAATTGTCTCAGCAAAGTTTCTAGTAAGCGCCCTTCAATAGAGGATGTTCTTTGGAATTTGCAGTACTCAATACAAGTCCAAGAGGCATGGACCAGCAGTGGAAACCTCAGCACAAAATTTTAA	2178	0.427	MKVFWVSFLCLYPAIILVLLCPISRAQLSSSETRILLQVQRYLEYPQVLQGWRSWTSFCYLPPSPSLRIVCSKNHVTELTIVGNKVSSSAQTLSARFSIDSFFTVLTKLSSLKVLSLVSLGLWGPLPSKIDRFWSIEVLNISSNFISGEIPSSISSLKNLRCLVLADNLFNGSIPDLEPLASLEELNLADNTLGHEFPSLGNNLVRIVLKNNSLRFRIPPQLMHFHNLQEFDLSSNDVFGTIPSSLFSLPSIFYINLAENHLTGVFSVNTICNSALTFVDVSDNLLMGNFPPCIGSKSSNRTVLYSGNCFSTRTYNGQNQHPFTYCKKEKALAVEPIERSQKEKSGMKLVAVLGVIGGSLGLAVLLSLLILFIWKKRKAEREDGKNLDRSAAHNPPRLSTNARRIPQTRRLSAVGLPPYRIFPLEEMEDATNNFDPSNLIAERPQGQLYKGWLRDGSVVLVNCVEVVQKNLPQSFMQYMEVLPNLRHRHLVSVLGHCVVSSQDHPQPTSTVFIVSEYFSNGSLRDHLTDLRRNQILKWPQRMAITIGIAKGTQFLHTGVVPGIFGNDLKIENILLDDSLNPKVGGYKIPLPYKNGFDSTFCVQSTPTHVGRMDEAEKEDIYQLGVILLEVITGKRITSASEIEELKDELERGLSEVDSIRRSAVDPSIQGTYAYESLTTAVQITINCLSKVSSKRPSIEDVLWNLQYSIQVQEAWTSSGNLSTKF	725

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g2413	725	SUPERFAMILY	L domain-like	39	311	-	-
	Bisa11g2413	725	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	354	714	-	-
	Bisa11g2413	725	SMART	serkin_6	434	708	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa11g2413	725	Gene3D	Ribonuclease Inhibitor	29	201	IPR032675	-
	Bisa11g2413	725	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	518	721	-	-
	Bisa11g2413	725	Gene3D	Ribonuclease Inhibitor	202	335	IPR032675	-
	Bisa11g2413	725	ProSiteProfiles	Protein kinase domain profile.	434	709	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa11g2413	725	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At2g02780	29	202	-	-
	Bisa11g2413	725	Pfam	Protein kinase domain	462	702	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa11g2413	725	Coils	Coil	642	662	-	-
	Bisa11g2413	725	Gene3D	Transferase(Phosphotransferase) domain 1	518	718	-	-
	Bisa11g2413	725	Gene3D	Phosphorylase Kinase; domain 1	399	504	-	-
	Bisa11g2413	725	SUPERFAMILY	Protein kinase-like (PK-like)	413	705	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g2413	Bisa-ChrBisa11	48698491	48701969	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g2413	24	646	Miscellaneous Gene Families	AT2G02780	49.383	0.0	548

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Bisa11g2413		Pkinase	1e-16	CL0016