Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2410 ATGAAACTATTGTTGTCACATATTGTGAAAGACTACCAATTACTTAAAATGCATTTCTTTGACATCCTGCGACAAGATCATATCAATCAACAACAACAACAACAACAAGATGGAGAAGAAGCTACCAAAGCTACAACAGGCACAGCTGATCTTAGCCCTAATAATAATATTGAAGACATCAATAATGAAGAATATAACAAGCTTGTCTCCCTCTCTCTAGGGTTTTCATCCAAAAGTAGCATTAATATTAATAGAAACATTAACGAGGACGAGAAGAATTTGGGAGAAGGGCTTGCACTTGGGCTAAATATAATCAGATTTAACCCTTCAAAAGCTGAAGTTGAAGCTACAAATATGGCAAGCATGGTTGAAGGTAGCTCTGCTGAGGAAGCCGCTCAGACTGATCAGATATCGGCCATATGCCCACCCAGCAAGGTTCTCAAGACAATGACAAGTTGTGAGGATATTACTATTGACGCTTCTCAACAAGCTCTGCTCAAGAAACCTAGGGTTTCCATCAGTGCCAGATGTGACACTCAAACGATGAATGATGGATGTCAATGGAGAAAATATGGACAGAAAATGGCTAAGGGAAGTCCATGCCCTAGGGCATATTACAGATGCACTGTCTCACCATCTTGCCCTGTGAGGAAACAGGTGCAAAGATGTGCAGAGGACACGTCGGTCTTGATAACCACATATCAAGGATCCCACGATCACCCACTTCCCATTTCTGCCACACCCTGGGCTTCAACTACCTCTCTGGCTGCTTCCATGCTTCAATCTCCCTCCTTCTTCTCTCATTATCCCTCTTCTTCTTCTTCTTCTTCTCACCTCAGAGTCCCTATCTTCACCTCATCATCCATTCCTCCTAATTACAGTACCGCCCTAAACTTCTCTGACTCTTCGAGGCCACCACATCTTCCCCAGCAATTCTGCTTCACAAGCTCTTCCATTTCCACCTCCACTTCCCACCCCACCATCACATTTGACTTCACTTCCCCTCCACAACCATCATCATCTTCCTCCCATCACTTCAGAAACCTCATCTCAGCCTTCTCTCCCACGCCAAATATTTCCTCATCTTCAACCTCTCTTTCCTCATCTTCAACCTCTCTTTACAATGCCGCTAATTATTCCAATGACTTCATGAATATTGGAAGCCATAGTGGTGGGACACAACCATTTCTTCACCAGCAGCAGCAGCACAAGGCATTGCCAGAAAAGACTATTCCAGCTGCAACAAAAGCAATCACCACCAATCCAAAGTTTCAATCTGCAATTGCTGCTGCACTCACTTCCTACGGTAACAATAGTAATAATAACAATGGAGTTGTTGGTGTTGGTGCTGGGTTGAACTTGAAGCTACATGGTGGTAGTAGTTACAGTTCTGGCTCATCATTGAGGTGTATGAATAAGTATGGTGTGTCTTCTTCTAATGGTGTTGATAATGCTCGACAAGGGAACTTGATACTGTTTCCAGTTCCACCAACTTTATCAATGGCATCACCAGTACTGCCAGTGGCATCTTGGAGTCCCTCTGTCTCTTCTGATAGAAGTAGCCAGATTCTTGAGCAATGGAAGACGAAGAATTTAACCATCACTTCAAAGGAATCAAACCTTCAATGA 1629 0.4328 MKLLLSHIVKDYQLLKMHFFDILRQDHINQQQQQQQDGEEATKATTGTADLSPNNNIEDINNEEYNKLVSLSLGFSSKSSININRNINEDEKNLGEGLALGLNIIRFNPSKAEVEATNMASMVEGSSAEEAAQTDQISAICPPSKVLKTMTSCEDITIDASQQALLKKPRVSISARCDTQTMNDGCQWRKYGQKMAKGSPCPRAYYRCTVSPSCPVRKQVQRCAEDTSVLITTYQGSHDHPLPISATPWASTTSLAASMLQSPSFFSHYPSSSSSSSHLRVPIFTSSSIPPNYSTALNFSDSSRPPHLPQQFCFTSSSISTSTSHPTITFDFTSPPQPSSSSSHHFRNLISAFSPTPNISSSSTSLSSSSTSLYNAANYSNDFMNIGSHSGGTQPFLHQQQQHKALPEKTIPAATKAITTNPKFQSAIAAALTSYGNNSNNNNGVVGVGAGLNLKLHGGSSYSSGSSLRCMNKYGVSSSNGVDNARQGNLILFPVPPTLSMASPVLPVASWSPSVSSDRSSQILEQWKTKNLTITSKESNLQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2410 542 FunFam probable WRKY transcription factor 31 167 244 - -
Bisa11g2410 542 Pfam WRKY DNA -binding domain 183 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa11g2410 542 SUPERFAMILY WRKY DNA-binding domain 176 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa11g2410 542 MobiDBLite consensus disorder prediction 30 57 - -
Bisa11g2410 542 Gene3D WRKY domain 168 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa11g2410 542 ProSiteProfiles WRKY domain profile. 177 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa11g2410 542 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 441 IPR044810 GO:0003700
Bisa11g2410 542 SMART WRKY_cls 182 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2410 Bisa-ChrBisa11 48682132 48685607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2410 1 447 WRKY Transcription Factor Family AT5G15130 36.601 7.05e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa11g2410 WRKY 1.2e-23 CL0274