Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2406 ATGATGGAGCTTGCAACTGTAAAAACTGAATTAGGCCCCAGAAGTCACGGGTTGCTCATGATGGAAGGTGGCAATGTTGCCACCGTGTGTGTCAAAAGGCGGCGAAGGGACCCATCCATTGCAATTTTGGGAAGTACGGAGCAACAAGAGCAGCGACCGCCGGGTAACCGATCAACCACCACCACCACCACCGTGAAGAGAAGCTCAAGATTCCGAGGAGTTAGCAGACATAGATGGACGGGGAGATATGAAGCTCATTTATGGGACAAAGGGACTTGGAATCCAACTCAGAAGAAGAAGGGAAAGCAAGGGGCTTATACTGATGAAGAAGCAGCTGCTAGAGCATATGATTTGGCTGCACTCAAATACTGGGGAGCTTCTACCTTCACAAATTTCCCTGTAAGTGATTATGGAAAGGAGATTGAGATCATGAAATCTATGACAAAAGAAGAATATCTTGCTTCTTTGAGAAGGAGAAGTAGTGGCTTTTCCAGAGGTGTGTCAAAGTATAGGGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGGATAGGGAGAGTGTTTGGCAACAAGTACCTCTATCTTGGCACTTATAGTACACAAGAAGAAGCTGCTCGGGCATATGATATTGCAGCAATAGAGTACAGAGGCATAAATGCAGTAACAAACTTCGACTTGAGCACATATATTAGATGGCTAAGACCAGAACCCCTTTCTTCTTCTTCTCAAGAACATAACCCAAGCCCACGCTTTCATCATCCCCTGACAAATCCTATCCTTATCCAAACCAGAGGAATCACCGAGTTATCCAATCTCAGTCACTATACAAAGGAGCAACAGATTCCTCAGTATATGACCCCTTTAAGTCATAATGGCCCCAAGTCGTCGTCGTCATCTCCAACAGCATTAGGACTTCTCCTGAAGTCTTCAGTGTTCAGAGAGCTTGTGAAGAAAAATCTGAATTCTGATAGTGGGAAAGGTCGAGTAGTAGATGAATTGGAAACCCCACAAGAAGGAAGCGAGGGATTCGCTTACTTGTGTTCTTCCAGTGGCAATAGACTACCAAACCTGCAGTCACCAGAAGAGAAAGCATTGCCTCTGCATCATAGAACTGTGCAGGAATGGTTCTCTGAACATCTCTAA 1149 0.4526 MMELATVKTELGPRSHGLLMMEGGNVATVCVKRRRRDPSIAILGSTEQQEQRPPGNRSTTTTTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYTDEEAAARAYDLAALKYWGASTFTNFPVSDYGKEIEIMKSMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPEPLSSSSQEHNPSPRFHHPLTNPILIQTRGITELSNLSHYTKEQQIPQYMTPLSHNGPKSSSSSPTALGLLLKSSVFRELVKKNLNSDSGKGRVVDELETPQEGSEGFAYLCSSSGNRLPNLQSPEEKALPLHHRTVQEWFSEHL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2406 382 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 CDD AP2 168 229 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 Gene3D AP2/ERF domain 168 229 IPR036955 GO:0003700|GO:0006355
Bisa11g2406 382 Gene3D AP2/ERF domain 69 135 IPR036955 GO:0003700|GO:0006355
Bisa11g2406 382 Pfam AP2 domain 168 219 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 Pfam AP2 domain 69 125 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 MobiDBLite consensus disorder prediction 42 69 - -
Bisa11g2406 382 MobiDBLite consensus disorder prediction 40 73 - -
Bisa11g2406 382 ProSiteProfiles AP2/ERF domain profile. 169 227 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 SUPERFAMILY DNA-binding domain 69 135 IPR016177 GO:0003677
Bisa11g2406 382 SMART rav1_2 70 139 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 SMART rav1_2 169 233 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 52 250 - -
Bisa11g2406 382 FunFam AP2-like ethylene-responsive transcription factor 168 229 - -
Bisa11g2406 382 ProSiteProfiles AP2/ERF domain profile. 70 133 IPR001471 GO:0003700|GO:0006355
Bisa11g2406 382 SUPERFAMILY DNA-binding domain 168 229 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2406 Bisa-ChrBisa11 48617670 48621350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2406 66 231 AP2-EREBP Transcription Factor Family AT5G57390 68.639 1.11e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa11g2406 AP2 2e-07 CL0081