Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2402 ATGGGACTGGGCGCTGAGAATGGTAAGGTGGACTCTTGGGATGTGGGCAAATCAAAGGGGAGGAAGAAGAAGAAGAAAGAAGGTGGTGTTAAAGAGGAAGGGACGGGGTGTTGGGTTACGCTCAGGTTCATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGACAGCTCAGTTAGCGGCACCAGTACTCATTATGCTGAAAGCAAATCAACTATTGATACAAGTAGAGACCAACCAACAGCTCCTGCAGTATCTTCTACAACAACTAGTAATGCAGAAAGCAATTCGTCCACATCCAAACTTGAAGAAGAGCTTAAAATAGCTTCCAGGCTGCGCAAGTTCTCATTTAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGATGGATTGAGGAAAATGGAACTGCCCCGGTGAAACCTGGCACAGGGCTTACTGTTGCTGTAAAAACTCTGAACCATGATGGGCTACAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTATCTTGGGGATCTAGTTCATCCAAATCTTGTTAAACTTATAGGTTACTGTATTGAAGATGATCAAAGGCTACTGGTGTATGAGTTTATGCCTCGGGGAAGCCTGGAAAACCACCTATTTAGGAGATCCCTGCCTCTTCCGTGGTCCATCAGGATGAAAATTGCACTTGGAGCTGCAAAGGGTCTTGCTTTTCTTCATGAGGAAGCTGAACGACCTGTAATATACAGGGATTTTAAAACCTCCAATATACTATTAGATGCAGAATACAATGCCAAGCTATCAGATTTTGGACTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACTGGACATCTTACGTCACGAAGTGATGTGTACAGTTTCGGAGTGGTGCTCCTAGAGATGTTGACTGGAAGAAGATCTATGGATAAAAACCGGCCCAATGGTGAACATAACCTTGTCGAATGGGCTCGACCACACTTGGGGGAGAGAAGAAGGTTCTACAGGTTGATAGACCCTCGGCTGGAAGGTCACTTCTCCATAAAAGGAGCTCAAAAAGCTGCCCAATTGGCTGCTCACTGCCTTAGTAGAGATCCCAAAGCCAGACCCCTGATGAGTGAAGTCGTAGAAGCTCTGAAGCCCCTTCCAAACCTTAAGGACATGGCAAGCTCATCATATTACTTTCAGACCATGCAAGCTGACCGCTTCGGAGCCAGCCCAAATACTCGAAATGGGCGGATGCAAGGAGGGTTGCTTACCAGGAATGGGCAGCGTAGCCTTTCAATCCCAAATGGCTCTTATGCATCTCCATATCACCATCAGTTTCCCCAACAATCACCAAAACCCAAAGGCAAAGCATAA 1443 0.4581 MGLGAENGKVDSWDVGKSKGRKKKKKEGGVKEEGTGCWVTLRFIGSCISSRSKVDSSVSGTSTHYAESKSTIDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRNGRMQGGLLTRNGQRSLSIPNGSYASPYHHQFPQQSPKPKGKA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2402 480 Gene3D Transferase(Phosphotransferase) domain 1 212 427 - -
Bisa11g2402 480 FunFam Serine/threonine-protein kinase BIK1 93 211 - -
Bisa11g2402 480 SUPERFAMILY Protein kinase-like (PK-like) 104 406 IPR011009 -
Bisa11g2402 480 CDD STKc_IRAK 132 409 - -
Bisa11g2402 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Bisa11g2402 480 Gene3D Phosphorylase Kinase; domain 1 85 211 - -
Bisa11g2402 480 PANTHER OS01G0588500 PROTEIN-RELATED 90 409 - -
Bisa11g2402 480 MobiDBLite consensus disorder prediction 431 470 - -
Bisa11g2402 480 MobiDBLite consensus disorder prediction 431 480 - -
Bisa11g2402 480 ProSiteProfiles Protein kinase domain profile. 126 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2402 480 FunFam Probable serine/threonine-protein kinase PBL8 212 427 - -
Bisa11g2402 480 Pfam Protein tyrosine and serine/threonine kinase 130 406 IPR001245 GO:0004672|GO:0006468
Bisa11g2402 480 MobiDBLite consensus disorder prediction 52 98 - -
Bisa11g2402 480 ProSitePatterns Protein kinases ATP-binding region signature. 132 164 IPR017441 GO:0005524
Bisa11g2402 480 MobiDBLite consensus disorder prediction 1 32 - -
Bisa11g2402 480 MobiDBLite consensus disorder prediction 52 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2402 Bisa-ChrBisa11 48565452 48569382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2402 73 406 Glycoside Hydrolase AT3G07070 54.142 2.30e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa11g2402 PK_Tyr_Ser-Thr 6.2e-46 CL0016