Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2393 ATGAAATGCGTGAACATGAATTCCCTTACTTCTTCTTATTCTTCCTCTCTCTACTCCCTCGCCAATTTCAACTCTCAACCGTTTTCCTCTGTTTTCTGCGTCGTTGATTCAAGAAGACCCAGAAGAAGGCCCAAGTTCAAGCCTCTGAATCTTACTGCTGTTAGGGAGGCTGGTTCTTCTTCGCTATGCTCTTTCAAGAAAGGGCTCTTTTACAGCGAATATTTGCATTGCCGTTGTTCTCCTGGATTTTTGAGGAGGTGTACAGATCGGGGCAGTGCGGATGATTTGACTCCGGAGGCGGAGAGTCTGGAGCTAGAAGCTTCGATTACCAAGAAAGAGTTGGTTGATGCTGGGAGGTTGGATTTGGTGGACACCATTTTGAAGGAAGGAGACGATCTGAAGGGCAATGAGGTTCGCTTTTCTGGAGTTACTTCTTTGGCTTCTTCTTCAGCCTACGATTCACAGCCACCTGTCAGAGGAGGTAGACCAGGACAAACGGAAGCCAAGGTGTCTGGCACTGAGGGCATATTAAGTGGACTGGAGAAGGAGAGAATTAATTCCTTGGTACGTGAATTTAGAGAGGAAGAAGATAGTCTTTCACTTGGAAAGAACGAAGAAAAAGATGAATCGCATCATAGAACCACCACAGATACAGACCAGAAAAGCTCCTCTGATGATCAACAGAAGCTTTCTGATGATTGGGAATTCCAGCAAAATAAAGTCAAGAATACCCAGAACAAGCTGCGTTCAGTACGTGTTAAGTTGGCAGTATTAGTAGGAAAGACTGAATTGGCATTAAGGGATGCACACAATATAGTGAAAGAGAAGCAGAGGAAGATTGATAGTAGTCATGAAGCCTTACAAGCTCTTAAGCCCGTTTGTATAGCTTGGGCTATTAAAGCCTCAGAAGTGCTTGTAACAGGATCATTTGACGGTTGGTCCTCCCAGAGAAAGATGGTGAAGTCGTCGGCAGATATTTTTTCTCTGAGCCTGCTTTTGTATCCTGGAAAATACGAGATCAAGTTCATTGTTGATGGAAAATGGAGGGTCGATCACTTACGCCCTATAGTCAATAATAACGGTCACGAGAATAATCTTCTCATCGTTCGAGAAATTTCGAATATTTCGTCTACTAGCTAG 1140 0.4386 MKCVNMNSLTSSYSSSLYSLANFNSQPFSSVFCVVDSRRPRRRPKFKPLNLTAVREAGSSSLCSFKKGLFYSEYLHCRCSPGFLRRCTDRGSADDLTPEAESLELEASITKKELVDAGRLDLVDTILKEGDDLKGNEVRFSGVTSLASSSAYDSQPPVRGGRPGQTEAKVSGTEGILSGLEKERINSLVREFREEEDSLSLGKNEEKDESHHRTTTDTDQKSSSDDQQKLSDDWEFQQNKVKNTQNKLRSVRVKLAVLVGKTELALRDAHNIVKEKQRKIDSSHEALQALKPVCIAWAIKASEVLVTGSFDGWSSQRKMVKSSADIFSLSLLLYPGKYEIKFIVDGKWRVDHLRPIVNNNGHENNLLIVREISNISSTS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2393 379 Pfam Glycogen recognition site of AMP-activated protein kinase 292 371 IPR032640 -
Bisa11g2393 379 MobiDBLite consensus disorder prediction 195 233 - -
Bisa11g2393 379 MobiDBLite consensus disorder prediction 147 175 - -
Bisa11g2393 379 Gene3D Immunoglobulins 289 371 IPR013783 -
Bisa11g2393 379 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 170 369 - -
Bisa11g2393 379 CDD E_set_AMPKbeta_like_N 292 369 - -
Bisa11g2393 379 SUPERFAMILY E set domains 290 370 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2393 Bisa-ChrBisa11 48391029 48394215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2393 293 378 Protein tyrosine phosphatase (PTP) family AT3G01510 30.337 1.97e-06 47.8