Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa11g2385 | ATGGTGGAAGGAGACTACTACAAGCTACTTCAGGTAACACGCAAAGCGAACGATGAAGAGCTGAAGAAGGCGTACAGAAACATGGCCATGAGATGGCATCCAGACAAGAACCATCAAAATCCAATCAAGAAAGAAGAAGCAGAGGCCAGATTCAAACAGATTTCTGAGGCTTACGATGTCCTCAGTAACCCTAGGAAGCGTAAGATCTACGACGAGGCTCACTATCCTCTTAATTATGGAAGCGTTGTTAATTATCAGAAGAAAAATCGCGATGGAGGCACTGAAGATGCGATTGGGGACCCCAAGAGGCGTAAGATCTACGATTTAGGTGAAAAACGATGTCGTATTAATTACGAGAGGGTTATCCTGAGAAATCCTGACGAGAATTTTGATATTCGGGAGGTGAAAGAGTTAAAAGCAGCGGCTATTGAGAACAAATTGGCGTTAAGCTTAGAGAATCTTTACACAGGTTGCCAAAGGAAAGTGAAAATCGCAAGGAGTGTTCCTGATGCTTTTGGTAAATTGATGTCTGTGGAAGAAATCTTGAACATAGAAATTGAGCCTGGTTGGAGGAAGGGCACAAAGATCACTTTTCCTAAGAAAGGCAATCATGAACCAGGAAGTTCTGCTGCAGCTGATCTAGTTTTTGTGGTGGATGAGAAACCTCACCCGTTCTTCAAGAGGGAAGGGAATGATTTAGTAGCCACTCACAGGATTTCACTTCTAGAGGCTCTCACGGGAAAGACTATCAAATTCAATACCTTGGACGGAAGAGAAATCACAGCGCCAGTGACTGATATTGTGAAACCAGGCAGTGAGCTGGTGATTCCAAATGAAGGGATGCCATTGCCAAAGGAACCAGGCAAAAGAGGAAACCTCAGAATTAAGTTTGATGTTGTCTTTCCATCACAGCTTTCCACGTTGCAGAAGTTTGATCTGAAAAGAATTTTGAGTGAAACTGATATCTAG | 969 | 0.4303 | MVEGDYYKLLQVTRKANDEELKKAYRNMAMRWHPDKNHQNPIKKEEAEARFKQISEAYDVLSNPRKRKIYDEAHYPLNYGSVVNYQKKNRDGGTEDAIGDPKRRKIYDLGEKRCRINYERVILRNPDENFDIREVKELKAAAIENKLALSLENLYTGCQRKVKIARSVPDAFGKLMSVEEILNIEIEPGWRKGTKITFPKKGNHEPGSSAAADLVFVVDEKPHPFFKREGNDLVATHRISLLEALTGKTIKFNTLDGREITAPVTDIVKPGSELVIPNEGMPLPKEPGKRGNLRIKFDVVFPSQLSTLQKFDLKRILSETDI | 322 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa11g2385 | 322 | Gene3D | - | 141 | 221 | - | - | |
| Bisa11g2385 | 322 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 317 | - | - | |
| Bisa11g2385 | 322 | CDD | DnaJ | 5 | 63 | IPR001623 | - | |
| Bisa11g2385 | 322 | ProSiteProfiles | dnaJ domain profile. | 5 | 74 | IPR001623 | - | |
| Bisa11g2385 | 322 | SUPERFAMILY | Chaperone J-domain | 5 | 77 | IPR036869 | - | |
| Bisa11g2385 | 322 | ProSitePatterns | Nt-dnaJ domain signature. | 51 | 70 | IPR018253 | - | |
| Bisa11g2385 | 322 | Pfam | DnaJ C terminal domain | 143 | 302 | IPR002939 | - | |
| Bisa11g2385 | 322 | CDD | DnaJ_C | 143 | 305 | - | - | |
| Bisa11g2385 | 322 | Gene3D | - | 223 | 303 | - | - | |
| Bisa11g2385 | 322 | SMART | dnaj_3 | 4 | 66 | IPR001623 | - | |
| Bisa11g2385 | 322 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 225 | 309 | IPR008971 | GO:0006457|GO:0051082 | |
| Bisa11g2385 | 322 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 138 | 233 | IPR008971 | GO:0006457|GO:0051082 | |
| Bisa11g2385 | 322 | FunFam | Dnaj homolog subfamily b member | 139 | 221 | - | - | |
| Bisa11g2385 | 322 | FunFam | DnaJ subfamily B member 13 | 223 | 303 | - | - | |
| Bisa11g2385 | 322 | PRINTS | DnaJ domain signature | 25 | 40 | IPR001623 | - | |
| Bisa11g2385 | 322 | PRINTS | DnaJ domain signature | 46 | 66 | IPR001623 | - | |
| Bisa11g2385 | 322 | PRINTS | DnaJ domain signature | 7 | 25 | IPR001623 | - | |
| Bisa11g2385 | 322 | Gene3D | DnaJ domain | 2 | 90 | IPR036869 | - | |
| Bisa11g2385 | 322 | Pfam | DnaJ domain | 5 | 71 | IPR001623 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa11g2385 | Bisa-ChrBisa11 | 48262377 | 48264498 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa11g2385 | 6 | 71 | C2H2 Transcription Factor Family | AT1G74250 | 34.328 | 3.62e-08 | 52.8 |