Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2384 ATGAAATCCTACAAACTCTACAGACCAGTGAAGGTTCCATTGGTGATGGTTATAGCGAAGGACATATGGCAACCCCTGGAATCTTGTGTTGCCACTATTTTTCTTCTTCCTCATCCCAGCGTTAGGGTTTCTGTCATATATTCATGTGTTGGTTCTGATGCAGTTGTGTCCTCTGATCTTGACTTGCAGATAAGCATAAACTACCCATCCAAAATGTCGCGGAAAGGTTTGATGGAACAAGACCTGAGTAAACTAGATGTAACAAAATTGCATCCTCTTTCTCCTGAAGTCATATCTCGGCAGGCTACCATTAATATTGGCACCATAGGTCATGTGGCCCATGGGAAGTCAACTGTTGTTAAAGCAATATCAGGCGTTCAGACTGTTCGTTTTAAAAATGAGTTGGAGCGTAACATTACAATCAAGCTTGGATATGCGAATGCAAAAATATATAAATGCGAGGATGAACGATGTCCTAGGCCCATGTGCTACAAGGCATATGGAAGTGGAAAAGAAGACAGCCCTTCGTGTGATGTGCCCGGTTTTGAAAACTTCAGGATGAAATTGTTAAGACATGTTTCTTTTGTGGATTGCCCGGGCCATGATATTCTCATGGCTACAATGCTTAACGGAGCGGCAATCATGGATGGAGCTTTATTGCTCATTGCTGCAAATGAGAGCTGTCCACAACCACAGACCTCTGAGCATCTTGCTGCTGTGGAAATTATGCGTCTACAACACATAATAATTCTCCAGAATAAGGTTGATCTGATTCAAGAAAATGTGGCTATTAATCAGCATGAAGCAATTCAGAAGTTCATCCAAGGAACAGTTGCTGATGGTGCCCCTGTAGTTCCAATTTCAGCACAGTTAAAGTATAATATTGATGTTGTGTGTGAGTATATTGTGAAAAAGATCCCAATCCCTGAAAGGAACTTTGTTTCTCCACCTAATATGATTGTAATCCGGTCATTTGACGTCAATAAGCCTGGGTTTGAGGTTGATGAAATTAAGGGAGGTGTGGCTGGTGGAAGCATTCTCAGGGGCGTTTTGAAGGTAAACCAATTCATTGAAGTTCGACCTGGAATAGTTGTTAAAGACGAGGGTGGGAATATCAAATGCACACCCATATACTCTAGAATAGTTTCATTATATGCTGAACAAAATGAGCTTCAATTTGCCGTGCCAGGAGGTCTTATTGGTGTTGGCACAACTATGGATCCCACTTTGACACGTGCTGACAGGTTGGTGGGGCAAGTTCTTGGAGAGGTTGGGTCGCTGCCTGAGGTTTATGTTGAACTTGAGGTGAACTTCTTCTTGCTTCGAAGGCTGCTTGGTGTGCGGACAAAGGGAACCGAGAGACAAGGGAAGGTATCTAAACTTGCAAAAGCAGAGATTCTGATGTTGAACATAGGATCAATGTCGACAGGGGCCAGAGTTGTTGCAGTAAAGAATGATCTGGCAAAGTTGCAACTAACCTCCCCGGTGTGCACTAGCAAGGGGGAGAAGATTGCTTTGAGTAGACGTGTTGAGAAGCATTGGCGTCTGATTGGGTGGGGCCAAATCCAAGCAGGAACCACTCTTGATGTCCCAGCTGCTCCCATTCTCACTTAA 1614 0.4362 MKSYKLYRPVKVPLVMVIAKDIWQPLESCVATIFLLPHPSVRVSVIYSCVGSDAVVSSDLDLQISINYPSKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMCYKAYGSGKEDSPSCDVPGFENFRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDEGGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVYVELEVNFFLLRRLLGVRTKGTERQGKVSKLAKAEILMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDVPAAPILT 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2384 537 CDD eIF2_gamma 104 311 IPR044128 GO:0005525
Bisa11g2384 537 FunFam Eukaryotic translation initiation factor 2 subunit gamma 428 527 - -
Bisa11g2384 537 SUPERFAMILY Translation proteins 311 425 IPR009000 -
Bisa11g2384 537 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 101 310 IPR000795 GO:0003924|GO:0005525
Bisa11g2384 537 Pfam Elongation factor Tu GTP binding domain 103 307 IPR000795 GO:0003924|GO:0005525
Bisa11g2384 537 Gene3D - 101 311 IPR027417 -
Bisa11g2384 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 313 IPR027417 -
Bisa11g2384 537 FunFam Eukaryotic translation initiation factor 2 subunit gamma 312 427 - -
Bisa11g2384 537 CDD eIF2_gamma_II 312 425 IPR044127 GO:0000049
Bisa11g2384 537 FunFam Eukaryotic translation initiation factor 2 subunit gamma 101 311 - -
Bisa11g2384 537 PRINTS GTP-binding elongation factor signature 210 221 IPR000795 GO:0003924|GO:0005525
Bisa11g2384 537 PRINTS GTP-binding elongation factor signature 248 257 IPR000795 GO:0003924|GO:0005525
Bisa11g2384 537 PRINTS GTP-binding elongation factor signature 105 118 IPR000795 GO:0003924|GO:0005525
Bisa11g2384 537 PRINTS GTP-binding elongation factor signature 194 204 IPR000795 GO:0003924|GO:0005525
Bisa11g2384 537 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 426 523 IPR009001 -
Bisa11g2384 537 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 72 530 - -
Bisa11g2384 537 CDD eIF2_gamma_III 428 522 IPR015256 -
Bisa11g2384 537 Gene3D Translation factors 313 427 - -
Bisa11g2384 537 Gene3D Translation factors 428 527 - -
Bisa11g2384 537 Pfam Initiation factor eIF2 gamma, C terminal 433 522 IPR015256 -
Bisa11g2384 537 Pfam Elongation factor Tu domain 2 339 421 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2384 Bisa-ChrBisa11 48255364 48260913 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2384 72 535 Eukaryotic Initiation Factors Gene Family AT1G04170 90.753 0.0 880