Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2380 ATGGCAACTTTCGGAGGATTATCAGAACAGTCTGCAAAATCTGTGGCGGTTATGGATGAGCAGTCCCCATGGCACCTTCAAGTTATGGGCTTGCCAGTAAACCAATTTGGACAGAAGAAGAAGAAGAAGTTGAAGATTCTATGTTTCCTGAAAGAAGAGAAGCAGCAAGAGGAGTCTCTGAATATGGGAAATGTGGATTTTGATTTTTCAGACCCTTCTCTCTCTGTGGCTCGTCGTGAAGCTGTGGAGTGGATTCTAGGAGTGAATACCCATTATGGGTTCTCTGCTCTCACCTCCATTCTCGCCATTAATTACTTGGACAGATTCCTTAAAAGCTTCAAATCTGGTTTTGAATGTGGGGGATACGAGGTACGTGTTCGAGGTGAAGACGATTCAGAGGAAGTAGCTTCTGGTTTTGTCGACTCTGAAATGGAAGATGCACCCTGTAACGCCATTGTCGCTCTTAGATCACATCGTCAGGAGGCTGGGCTTGCGCCGTATGCCAGAGGCTCTGCAAATCCAGACTCGATGGAAGACAGTGTTGCAGAAGAATATAAGAAGCAGCTTCTTGGTGATCTTAAAATCACCAAGGGAACAGTTGCTGATGGTGCCCCTGTACTTCCAATTTCAGCACGGTTAAAGTATAAAATTGATGTTGTGTGTGAGTATATTGTGAAAAAGATCCCAATCCCTGAACCACCTAATATGATTATAATCCAGTCATTTGGCGTCAATAAGCCTGGGTTTGAGGTTGATGAAATTAAGGGAGGTGTGGCTGGTGGAAGCATTCTCAGGGGCGTTTTGAAGGTAAACCAATTCATTGAAGTTCGACCTGGAATAGTGGTTAAAGACGAGAGTGGGAATATCGAATGCACACCCATATACTCTAGAATAGTTTCATTATATGCTGAACAAAATGAGCTTCAATTTGCCGTGCCAGGAGGTCTCATTGGTGTTGGCACAACTATGGAACCCACTTTGACACGTGATGACAGGTTGGTGGGGCAAGTTCTTGGAGAGGTTGGGTCGCTGCCTGAGGTTTATGTTGAAGGAACCACTCTTGATGTCCCAGCTGCTTCCATTCTCACTTAG 1092 0.4487 MATFGGLSEQSAKSVAVMDEQSPWHLQVMGLPVNQFGQKKKKKLKILCFLKEEKQQEESLNMGNVDFDFSDPSLSVARREAVEWILGVNTHYGFSALTSILAINYLDRFLKSFKSGFECGGYEVRVRGEDDSEEVASGFVDSEMEDAPCNAIVALRSHRQEAGLAPYARGSANPDSMEDSVAEEYKKQLLGDLKITKGTVADGAPVLPISARLKYKIDVVCEYIVKKIPIPEPPNMIIIQSFGVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIECTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMEPTLTRDDRLVGQVLGEVGSLPEVYVEGTTLDVPAASILT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2380 363 Gene3D Translation factors 231 344 - -
Bisa11g2380 363 Gene3D - 75 112 - -
Bisa11g2380 363 SUPERFAMILY Translation proteins 232 342 IPR009000 -
Bisa11g2380 363 SUPERFAMILY Cyclin-like 57 113 IPR036915 -
Bisa11g2380 363 CDD eIF2_gamma_II 233 342 IPR044127 GO:0000049
Bisa11g2380 363 Pfam Cyclin, N-terminal domain 69 112 IPR006671 -
Bisa11g2380 363 FunFam Eukaryotic translation initiation factor 2 subunit gamma 230 344 - -
Bisa11g2380 363 Pfam Elongation factor Tu domain 2 256 338 IPR004161 GO:0005525
Bisa11g2380 363 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 179 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2380 Bisa-ChrBisa11 48216963 48225329 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2380 194 350 Eukaryotic Initiation Factors Gene Family AT1G04170 80.247 8.52e-88 270