Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2372 ATGGATCCGGGAGCTATGATGAACGAGGGATCCTTTGCGAATGGCGGAACTAATACGGCGCCGTATAACCTGGCCGATATCTGGCAGTTTCCAATGAATGGCGGTGCGGGTCTTGGGGATTCTGGAGGCGGGTTGGGACTGAGGAGGCCGCAGTTCGGGCATAATTTGGGGCAGTTCCGCGGTGATTTTCCGGGTCCGAACAGGGATGTCGCGGGTAATAATACTACTGAACAAATCAGCTTGGAGCAGAGAGGGAGTCATGGGGTCAATAGGAAGCGGCGAGATTCCGAGGATGAGTCCACCAAGGGCGTCTCCACCAGCAATGGCGGCAATAGCGTGAATGATGGTGAAGGAAAACGGCTGAAAGCTTCAGGGAATAGGAGTGAGAGCCGTGACACTAAAGCTGAAGCAGAACCCAGTTCAGGAAAGCCTGCGGAGCAAAGTAACCAGCCACCCCCTGATCCTCCCAAGCAAGATTACATTCATGTACGGGCGAGAAGGGGTCAAGCTACTGATAGCCACAGCCTAGCAGAAAGAGCTAGGAGGGAAAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAACAAGGTTATTGGCAAAGCATTGGTCCTTGATGAGATAATTAATTATATCCAATCACTACAGCGCCAAGTTGAGTTCTTGTCCATGAAACTTGAAGCAGTAAATTCAAGACTGAACTCTGGCATTGATGTGTTTCCACCTAAAGATTTTGGTCAACAAACCTTTGACACAGGCGGCATGGCATTTGGTTCACAAGCTACAAGAGAGTATAGCCGGGGTTCTTCGCCAGAGTGGTTACATATGCAGGTTGGAGGTGGTTTTGAAAGAACATCTTAG 873 0.4948 MDPGAMMNEGSFANGGTNTAPYNLADIWQFPMNGGAGLGDSGGGLGLRRPQFGHNLGQFRGDFPGPNRDVAGNNTTEQISLEQRGSHGVNRKRRDSEDESTKGVSTSNGGNSVNDGEGKRLKASGNRSESRDTKAEAEPSSGKPAEQSNQPPPDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIDVFPPKDFGQQTFDTGGMAFGSQATREYSRGSSPEWLHMQVGGGFERTS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2372 290 MobiDBLite consensus disorder prediction 69 85 - -
Bisa11g2372 290 Gene3D - 166 242 IPR036638 GO:0046983
Bisa11g2372 290 MobiDBLite consensus disorder prediction 35 160 - -
Bisa11g2372 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 219 IPR011598 GO:0046983
Bisa11g2372 290 SMART finulus 175 225 IPR011598 GO:0046983
Bisa11g2372 290 MobiDBLite consensus disorder prediction 120 139 - -
Bisa11g2372 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 236 IPR036638 GO:0046983
Bisa11g2372 290 Coils Coil 216 236 - -
Bisa11g2372 290 Pfam Helix-loop-helix DNA-binding domain 173 220 IPR011598 GO:0046983
Bisa11g2372 290 FunFam Basic helix-loop-helix transcription factor 166 238 - -
Bisa11g2372 290 MobiDBLite consensus disorder prediction 86 101 - -
Bisa11g2372 290 CDD bHLH_AtBPE_like 159 244 - -
Bisa11g2372 290 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 82 260 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2372 Bisa-ChrBisa11 48060041 48062569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2372 1 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 56.202 7.78e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2372 HLH 2.4e-08 No_clan