Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2365 ATGCAGATGAAAACCTTTAGATTATTTGTTTTGTTACAACACAGCAAACCAAAGCGAACGAACAGACAATGTAGAAGACCACCGGTGACGATGCAGAACACAGCCAATGACCAGAGAAGCATCGGACATGAAAATGGCAATAAATGGGAAAGGCGGGAAAATGGCAACAAACGAAGGTTGATGGTGATGGCTGTCTCGTCTGAGTCACTTGGCTTTGAAGAAAGGCAAGTACACCGGGCCAGGTTAATGGGTGAAGCGGGCCAGGAGGATGGGGCGGTTTGGGCGTTTATCTTTGAGGCAAGCATGGAATCCCTCACCAGCGCCATTCATAGCGATGGTACATACACTTTGACTTTTCGACGCAAATTGGGTGCATGCTCTGTCGGGGTACTAGTACTACAACGTACAGTAGAATTCAATTCCGCAGCACCTAGACGACGGAAAATCACTGAGCTATCAGTTGCACAACTCACATTTCTTCTTCACCAAGCATATATGTCGTCGGAAAATGACGTTGTCTCATCTGCTCCGGGAGGTTTCAGGCTCCGATTGGACGTGTTCTTGAGCTTCAGAGCTCCGGACACCCGCGACTCCATCACCAAGCATCTGTACGACACACTCCAATCTTGTGGCGTTCGAGTTTTCCGCGATGACGACAGATTGCGTCGGGGTGAGGAGATTGCACCGAGTCTGCTCGAAGCTATCGATGACTCGGCCGCATCCATTGTCAACCTCTCACCCAACTACGCCTCTTCCCGCTGGTGTCTCGAGGAGCTTGCCAAGATTTGGGAGTGCCAGAGACTGATTCTGCTTGTGTTTTTCTACGTCAACCCGTCGGACGTCCGAAAGCAGAAGGGCCCCTTTGAAGAATCTTTCCAGAACCACGAAAGTAGGTTTCAGAAAGAAAAGGTGAATAAGTGGAGGGAAGCGATGAACAAAGTGGGAGGAGTTGCTGGATGGGTATTCCCAAAAAACAGGGGAGAAGCTGAACTAGTTCGACAATTGGTACAAATGATTCTAAAAGAACTAAGTAAAACTCCAGTGGGTATGGTTGAATTTACAGTTGGACTTGATGATCGTGTTGAAGAACTGTTGAAATTGTTAGAACTGAAGTCCAATAGTGTGAAAATACTTGGCTTATTTGGTATAGGTGGAATTGGAAAAACTACCCTCGCCAAGACTCTTTACAACAAACTCGTGGCTCATTTCGAGTGTCGCAGTTTCATTTCAGATGTCAGGGAAGCTTCATCAACAATGGAAGTCTTAGACGATGTTAGTGATGTAAACCAGCTAGATTCCTTGATTGGCAAAAAGGAATGGCTTTATAATGGTAGCCGTGTTATAATTACCACAAGAGATAAACAAGTTTTACCAGAGAGTTATGTTGAGAGTAATGAGCTCTATGAGGTAAAGGAATTGAAGTTATCTGAAGCACTAGAGTTATTCAGCTACCATTCTCTAAGAAGAAAAGAACCAGTAGAGAACTTTTCGAATTTGTCAAAAAAAATTGTGTCTCTTACAGGAGGATTGCCTTTGGCCTTGGAAGTGTTTGGCTCTTTCTTGTTTGATAAAAGGAGGGAGGAGGAATGGAGGGATGCTCTGGAGAAGCTTAAGCAAATTCGTCAGGGTGTATTGAAGATTAGTTTTGATGGGTTGGATAAACAGGAGAAGTGTATATTCCTTGACATTGCTTGTTTCTTTGTGGGAATGGAAATGAACAGAGATGATGTGGTTGATGTCTTGAGGGGTTGTGGATTTAAGGGAGAGATGGCAATCACAGTGCTCTGTAACAAATGTCTGATCAAAATCAAAGAGGATAGCGAACTGTGGATGCATGATCAGATTCGAGACATGGGAAAGCAAATTGTTATAAATGAAAACCTCACTGATCCTGGTGAGCGTAGTCGATTGTGGAACCGTGATGAAATCATGTCTGTTTTGAAGGATAAAAAGGGAACAAGATGTATCCAAGGGATTGTTCTAGGTTTCACAAAGCAAAGCACGCCGGAGGTGAGACATCACCGTGGTGATGAAATTACCTGGGATAATTTTCGACAAAAGCCCAGTTATAATTCTGCATTAGCATGCATGAAAGAAAGGTACAAGAAATATTTGCAGGATCGAGAAGAGAAAGCAAGAATGTTGGTACTTCAGACGCGGAACTTTCAATCAATGGTTGCCTTGAGACTTCTTCAAATCAATCATTGGAGAATGGAAGGAAAATTCAGATGCCTTCCTCTGGGATTGAAGTGGCTACAATGGAACAGATGTCCACTAAGAAAATTTTCTTTTGACTATGTTCCTTCAGAAATTGCTGTGCTTGATCTGTCAGAATCAGATTGA 2343 0.4362 MQMKTFRLFVLLQHSKPKRTNRQCRRPPVTMQNTANDQRSIGHENGNKWERRENGNKRRLMVMAVSSESLGFEERQVHRARLMGEAGQEDGAVWAFIFEASMESLTSAIHSDGTYTLTFRRKLGACSVGVLVLQRTVEFNSAAPRRRKITELSVAQLTFLLHQAYMSSENDVVSSAPGGFRLRLDVFLSFRAPDTRDSITKHLYDTLQSCGVRVFRDDDRLRRGEEIAPSLLEAIDDSAASIVNLSPNYASSRWCLEELAKIWECQRLILLVFFYVNPSDVRKQKGPFEESFQNHESRFQKEKVNKWREAMNKVGGVAGWVFPKNRGEAELVRQLVQMILKELSKTPVGMVEFTVGLDDRVEELLKLLELKSNSVKILGLFGIGGIGKTTLAKTLYNKLVAHFECRSFISDVREASSTMEVLDDVSDVNQLDSLIGKKEWLYNGSRVIITTRDKQVLPESYVESNELYEVKELKLSEALELFSYHSLRRKEPVENFSNLSKKIVSLTGGLPLALEVFGSFLFDKRREEEWRDALEKLKQIRQGVLKISFDGLDKQEKCIFLDIACFFVGMEMNRDDVVDVLRGCGFKGEMAITVLCNKCLIKIKEDSELWMHDQIRDMGKQIVINENLTDPGERSRLWNRDEIMSVLKDKKGTRCIQGIVLGFTKQSTPEVRHHRGDEITWDNFRQKPSYNSALACMKERYKKYLQDREEKARMLVLQTRNFQSMVALRLLQINHWRMEGKFRCLPLGLKWLQWNRCPLRKFSFDYVPSEIAVLDLSESD 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2365 780 PRINTS Disease resistance protein signature 377 392 - -
Bisa11g2365 780 PRINTS Disease resistance protein signature 507 521 - -
Bisa11g2365 780 PRINTS Disease resistance protein signature 766 780 - -
Bisa11g2365 780 MobiDBLite consensus disorder prediction 17 53 - -
Bisa11g2365 780 SUPERFAMILY "Winged helix" DNA-binding domain 543 648 IPR036390 -
Bisa11g2365 780 Pfam NB-ARC domain 419 553 IPR002182 GO:0043531
Bisa11g2365 780 SUPERFAMILY Toll/Interleukin receptor TIR domain 179 320 IPR035897 -
Bisa11g2365 780 ProSiteProfiles TIR domain profile. 182 343 IPR000157 GO:0007165
Bisa11g2365 780 SMART till_3 183 317 IPR000157 GO:0007165
Bisa11g2365 780 Gene3D - 181 345 IPR035897 -
Bisa11g2365 780 Gene3D - 473 553 IPR042197 -
Bisa11g2365 780 FunFam Disease resistance protein (TIR-NBS-LRR class) 181 345 - -
Bisa11g2365 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 563 IPR027417 -
Bisa11g2365 780 Pfam TIR domain 185 346 IPR000157 GO:0007165
Bisa11g2365 780 Gene3D - 417 465 IPR027417 -
Bisa11g2365 780 Gene3D - 346 416 IPR027417 -
Bisa11g2365 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 185 779 IPR044974 GO:0006952
Bisa11g2365 780 MobiDBLite consensus disorder prediction 25 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2365 Bisa-ChrBisa11 47946898 47952197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2365 185 661 WRKY Transcription Factor Family AT4G12020 27.462 4.71e-47 179