Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2364 ATGTCGCCGGAAAACGACGTCGTCTCATCTGTTCCGGGAGGTTTCAGGCTCCGATGGGACGTGTTCTTGAGCTTCAGAGGTTGGGACACCCGCGAATCCATCACCAAGCATCTCTACGAAGCGCTCCAATCTCGCGGCGTCCGAGTTTTCCGCGATGATGACGGATTGCGTCGGGGCGATGAGATCGCACCGAGTCTGCTCGAAGCTATCGATGACTCGGCCGCATCCATTGTCATTCTCTCACCCAACTACGCCGATTCCCACTGGTGTCTCGAGGAGCTCGCCAAGATTTGGGAGTGCCGTAGACTGATTCTGCCGGTGTTCTACAACGTCGATCCCTCGGACGTTCGAAAGCAGACAGGCCCCTATGCACAATATTTCAAGAACCACGAAAGCAGGTTTCAGAAAGAAAAGGTGAGTAGGTGGAGGAAAGCGCTGAACAAAGTGGGTGGGGTTGCTGGATGGGTATTCCCGAACGCCAGAGGAGAAGCTGAGCTAGTTCGACAGTTGGTACAAAGGATTCTAAAAGAATTAAGTAAAACTCCAGTGGGTGTGGCTGAATTTACGGTTGGGCTCGATGATCGTGTTGAAGAACTGTTGAAATTATTAGACCTGAAGTCCAAAGATGTCAGGGAAGCTTCATCAACAGAGGAAGGTTTAATTTCTCTTCAAAACAAGCTTATTAGTAATCTATCCTCGATAACAAGGGGTACCGTGAATGATATCAACGATGGTATTGAAACAATTAGAAGGATAGTTAAGCAAAACAGAGTTCTGGTAGTCCTAGACGATGTTAATGATGTAAACCAGCTAGATTCCTTGATTGGTAGGAAGGAATGGCTTTATAATGGTAGCCGTGTTATAATTACCACAAGAGATAAACAAATTTTACCAGAGAGTTATGTTACAAGTAATGAGCTCTATGAGGTAAAAGAATTGAAGTTATCTGAAGCACTAGAGTTATTCAGCTACCATTCTCTGAGAAGAAAAGAACCAGTAGAGAACTTTTCGAATCTGTCCAAACAAATTGTGTCTCTTACAGGAGGATTGCCTTTGGCCTTGGAAGTGTTTGGCTCTTTCTTGTTTGATAAAAGGAGGGAGGAGGAATGGAGGGATGCTCTGGAGAAGCTTAAGCAAATTCGTCCTGGGAATCTTCAGGGTGTATTGAAGATCAGTTTTGATGGGTTGGATGAACAGGAGAAGTGTATATTCCTTGACATTGCTTGTTTCTTTGTGGGAATGGAAATGAATAGAGATGATGTGGTTGATGTATTGAGGGGTTGTGGATTTAAGGGAGAGATTGCAATCACAGTACTCTGTAACAAATGTCTGATCAAAATCAAAGAGGATAGTGAACTGTGGATGCATGATCAGATTCGAGACATGGGAAAGCAAATTGTTATAAATGAAAACCTCACTGATCCTGGTGAACGTAGTCGATTGTGGAACCGTGATGAAATCATGTCTGTTTTGAAGGATAAAAAGGTAGTGGCTAGTTTACTTACCTTCTCTATTGAAAAGTCTGGTGTCAATAGCTTTCCAATGTCTGCTGCATTTCTGGATTGTCACCTAAAAGCCGAAGGAACAAGATGTATCCAAGGGATTGTTCTAGGTTTCACAAAGCAAAGACTGCCGGAGGTGAGACATCACCGTGGTGATGAAATTACCTGGGATAATTTTCGACAAAAGCCCAGTTGTAATTCTGCATTAGCATACATGAAAGAAAGGTACAAGAAATATGTACAAGAACGAGCTGAGAAAGCAAGAATGTTGGTACTTCAGACGCAGAACTTTCAATCAATGGGTGCCTTGAGACTTCTTCAAATCAATCATTGGAGAATGGAAGGAAAATTCAGATGCCTTCCTCGGGGATTGAAGTGGCTTCAATGGAACAGATGTCCACTAAGAAAATTTTCTTTTGACTATGTTCCTCCAGAAATTGCTGTGCTTGATCTGTCAGAAAGTCAGATTGAAACTGTGCAGGGCAGGCATAGTAACAAGGTGTGTGAGAACTTAATGGTTTTAAACCTCTCTAAAAGTTATAGTTTGAGAGCAATTCCTGATTTAACTGGGTATTCATCTCTAGAAAAGATTGATCTGGTGGGATGCATTTCATTAAGTAAGATTCATGAATCTGTTGGAAGTTTGAGTTCATTAGTCAGGTTGAACATGCATCAATGCAAAAACCTTCTTGAATTACCCAACGATGTCTCTGGGCTGACGCATCTTGAGAGTCTTATTCTTTCTGATTGCAGAAAATTGAAGGCATTACCAAAGGACATAAGCCGCATGGTCTCATTAAGACAACTTCTTCTTGATAACACCACCATAAGTGAGCTTCCTGAGTCCATTTTCCGCCTCTCAAAACTGGAGAAGTTGAGTGCTGACGGATGCCATTCCCTGAAGAGGCTTCCCACTTGCATTGGGAAACTATGCTCTTTGCGGGAACTGACTCTTCATGATACTGCATTGGAGAGATTGCCTGATTCTATTGGGTCTTTGAAAAACCTTGAGAGGCTTGGCTTGATAGGGTGTTTATCACTCACTACAGTTCCTGATTCTGTTGTGGAACTAGAATCATTGACGCAACTACTTTTGAATCGAAGTGGAATTAAAGAGCTGCCTGCTTCTATTGGTTCCTTGTCATATTTAAGGGACCTAAGTGTTGGTAATTGCAAGCAGCTTGTCAAATTGCCTGAATCAATAGAAACATTAGCTTCTATTACTGAGCTTCACTTGGATGGAACATCAATTACCGATTCGATAGTGAATTTGGAAAATCTTGTCCGGCTTAGATTAGACATGTGCAAACAGCTCAAGAGGCTTCCAGATTCTATCGGAAAACTAAAATCTTTGTGTCATTTATTGATGAAAGAAACAACTATCACACAACTCCCTGATAGCTTTGGGATGCTTTCAAGCTTGGTAATATTAGACATGAAAAGAACGCCTTATCTTAACATGGCTGGAAACAATATGCCTACTGGGGCTAATTCTATATTTCCTAGCGAACATGAAGAACCCAATTCAACTACCATTCTATCTTCCCTCAGTTGTCTAACCTTGCTAGTAGAGTTGAATGCTCATGGCTGGAGAATATCTGGTAAAGTACCTGATGATTTTGAAAAGCTTTCATCATTAGAGACTTTAGACCTTGGCCATAATAGTATTTGCAGTCTTCCGGCCAGCATGAAAGGCCTCTCCTGTCTGAAAAAGCTTTTGTTGCCACATTGTAGGGAGCTCAAGTTTCTCCCTCCTCTTCCCTCTAGCTTAACAGAAGTGGATGTTGCAAACTGTACCGAGTTACAATATATATCTGATATTTCAACCTTGGACAGCTTAGAGGAGCTTAAACTCATAAATTGCGAAAAAGTGGCTGATATTCCAGGTCTCGAACACCTGAAGTCCTTGAGAAGATTGTACATGAATGGTTGCAATGGATGCTCCTCCGCTGTAAAGAAAAGGTTTTCCAAGGTTCTGATGAAAAAATTAAAGATTTTGGTGATGCCCGGCAGCAAAATTCCAGATTGGTTTGCAGGAGAAGCAGTTCGCTTTTCCAAACCGAGAAACTGTCAGCTCCAGGGGATCATTTGTAGTGGTGTGCTCTCTTTCAACAACATACCCGAAAACCAACGTGATAGCCTGTCATTGTGTGATGTTATAGCAAAGATCCTCAACTTGACTCATTGTGTATTTCAGACAATGTTTCCTCTGCGAGGAATTCCCAGGACAAACGAAGAGCACATATTTTTGCTTAGGTTTGAAGATCATCCTTTAGTTCTTCTGGTAAAAGATGGATACAAGTTACAAGTGACAAAGCAAAACCCACCCCACGTTGAACAGCTTGAGTTGAAGGAATGTGGAATTCATTTGCTCTTTGAAGGCGATGATGATTATGATGGAGATGAAGGATCGCTGGACGAAAGCCAACACTCTGTTTCACAGAGGTTAGCCAAGTTCTTCAACTCTATGTGA 3975 0.4204 MSPENDVVSSVPGGFRLRWDVFLSFRGWDTRESITKHLYEALQSRGVRVFRDDDGLRRGDEIAPSLLEAIDDSAASIVILSPNYADSHWCLEELAKIWECRRLILPVFYNVDPSDVRKQTGPYAQYFKNHESRFQKEKVSRWRKALNKVGGVAGWVFPNARGEAELVRQLVQRILKELSKTPVGVAEFTVGLDDRVEELLKLLDLKSKDVREASSTEEGLISLQNKLISNLSSITRGTVNDINDGIETIRRIVKQNRVLVVLDDVNDVNQLDSLIGRKEWLYNGSRVIITTRDKQILPESYVTSNELYEVKELKLSEALELFSYHSLRRKEPVENFSNLSKQIVSLTGGLPLALEVFGSFLFDKRREEEWRDALEKLKQIRPGNLQGVLKISFDGLDEQEKCIFLDIACFFVGMEMNRDDVVDVLRGCGFKGEIAITVLCNKCLIKIKEDSELWMHDQIRDMGKQIVINENLTDPGERSRLWNRDEIMSVLKDKKVVASLLTFSIEKSGVNSFPMSAAFLDCHLKAEGTRCIQGIVLGFTKQRLPEVRHHRGDEITWDNFRQKPSCNSALAYMKERYKKYVQERAEKARMLVLQTQNFQSMGALRLLQINHWRMEGKFRCLPRGLKWLQWNRCPLRKFSFDYVPPEIAVLDLSESQIETVQGRHSNKVCENLMVLNLSKSYSLRAIPDLTGYSSLEKIDLVGCISLSKIHESVGSLSSLVRLNMHQCKNLLELPNDVSGLTHLESLILSDCRKLKALPKDISRMVSLRQLLLDNTTISELPESIFRLSKLEKLSADGCHSLKRLPTCIGKLCSLRELTLHDTALERLPDSIGSLKNLERLGLIGCLSLTTVPDSVVELESLTQLLLNRSGIKELPASIGSLSYLRDLSVGNCKQLVKLPESIETLASITELHLDGTSITDSIVNLENLVRLRLDMCKQLKRLPDSIGKLKSLCHLLMKETTITQLPDSFGMLSSLVILDMKRTPYLNMAGNNMPTGANSIFPSEHEEPNSTTILSSLSCLTLLVELNAHGWRISGKVPDDFEKLSSLETLDLGHNSICSLPASMKGLSCLKKLLLPHCRELKFLPPLPSSLTEVDVANCTELQYISDISTLDSLEELKLINCEKVADIPGLEHLKSLRRLYMNGCNGCSSAVKKRFSKVLMKKLKILVMPGSKIPDWFAGEAVRFSKPRNCQLQGIICSGVLSFNNIPENQRDSLSLCDVIAKILNLTHCVFQTMFPLRGIPRTNEEHIFLLRFEDHPLVLLVKDGYKLQVTKQNPPHVEQLELKECGIHLLFEGDDDYDGDEGSLDESQHSVSQRLAKFFNSM 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2364 1324 Gene3D - 208 303 IPR027417 -
Bisa11g2364 1324 ProSiteProfiles Leucine-rich repeat profile. 1046 1067 IPR001611 GO:0005515
Bisa11g2364 1324 PRINTS Disease resistance protein signature 347 361 - -
Bisa11g2364 1324 PRINTS Disease resistance protein signature 714 730 - -
Bisa11g2364 1324 PRINTS Disease resistance protein signature 252 266 - -
Bisa11g2364 1324 SMART LRR_typ_2 925 949 IPR003591 -
Bisa11g2364 1324 SMART LRR_typ_2 858 881 IPR003591 -
Bisa11g2364 1324 SMART LRR_typ_2 764 787 IPR003591 -
Bisa11g2364 1324 SMART LRR_typ_2 1044 1066 IPR003591 -
Bisa11g2364 1324 SMART LRR_typ_2 811 834 IPR003591 -
Bisa11g2364 1324 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 813 966 IPR044974 GO:0006952
Bisa11g2364 1324 Gene3D Ribonuclease Inhibitor 919 1253 IPR032675 -
Bisa11g2364 1324 Gene3D Ribonuclease Inhibitor 575 918 IPR032675 -
Bisa11g2364 1324 SUPERFAMILY "Winged helix" DNA-binding domain 385 492 IPR036390 -
Bisa11g2364 1324 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Bisa11g2364 1324 SMART till_3 18 152 IPR000157 GO:0007165
Bisa11g2364 1324 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 180 - -
Bisa11g2364 1324 Gene3D - 313 403 IPR042197 -
Bisa11g2364 1324 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Bisa11g2364 1324 Gene3D - 16 185 IPR035897 -
Bisa11g2364 1324 SUPERFAMILY L domain-like 894 986 - -
Bisa11g2364 1324 Pfam TIR domain 19 181 IPR000157 GO:0007165
Bisa11g2364 1324 SUPERFAMILY L domain-like 663 1145 - -
Bisa11g2364 1324 Pfam NB-ARC domain 224 380 IPR002182 GO:0043531
Bisa11g2364 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 407 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2364 Bisa-ChrBisa11 47920246 47926436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2364 19 887 WRKY Transcription Factor Family AT4G12020 27.382 4.37e-66 244