Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2362 ATGTTGTCGGAAAACAACGTCATCTCATTTGTTGCGGGAGATTTTAGGCTCCGATGGGACGTGTTCTTGAGCTTCAGAGGTTCGGACACCCGTGACTCCATCATCGAGCTTCTCTATGAAGCGCTTCAATCACGCGGCATTCGAATTTTTCGTGACGATGACGGATTGTGTCGGGGCAATGAGATCGCAAAAAGTCTAGTCGAAGCTATCGATGACTCGGTCGCATCCATTGTCATCCTCTCACCCAACTACGCAGAATCCCACTGGTGTCTCGAGAAGCTCGCCAAGATTTGGGAGTGCCGGAGACTGATTTTGCCAGTGTTCTACAATGTCGACCCCTCGGATGTTCGAAAGCAGACGGGCCCTTTTGCAAAAGATTTCAAGAACCATGAAAGTAGTTTTCAGGAAGAAACGGTGAGTAGGTGGAGGAAAGCGATGAACATTGTGGGTGGAATTGTTGGATGGGTATTCCCGGACGCCAGGGGAGAAGCTGAGCTAGTTCGACAATTGGTAAAAATTATTCTAAGAGAACTAAGTAAAACTCCTGTGGCTGAATTTACGGTTGGACTCGATGATCGTGTTGAAGAACTGTTGAAATTGTTAGACATGAAGTCCAATGAAGTGAAAGTACTGGGCTTATTTGGGATAGTGACGAGTATTGTGAATAATATCAACGATGGTATTGACACCATTAGAAGGATAATTAAGCAAAACCAAGTTTTGGTAGTCTTAGACGATATTAGTGATGTAAACCAGCTGGATTCCTTGATTGGTAAAAAGGAATGGCTTTATAATGGTAGCCGTGTTATAATTACCACAAGAGATAAACAAGTTTTACCAGAGAGTTATGTTAAGAGTAATGAGCTCTATGAGGTAAAGGAATTGAAGTTACCTGAAGCACTAGAGTTATTTAGCTACCATTCCCTAAGAAGAAAAGAACCAGCAGAGAACTTTTTGAATCTGTCAAACCAAATTGTGTCTCTTACAGGAGGATTACCTCTGGCCTTGGAAGTCTTTGGCTCTTTTTTGTTTGATAAGCGGAGGGAGGAGGAATGGAGGGATGCTCTGGAGAAGCTGAAGCAGATTCGTCATGGGAATCTTCAGGGCGTATTGAAGATCAGTTTTGATGGGTTGGATGAACAGGAGAAGTGTATCTTCCTTGACATTGCTTGTTTCTTTGTGGGAATGGAAATGAAAAGAGATGGTGTGGTTGATGTGTTAAGGGGTTGTGGATTTAAAGGAGAGATTGCAATCACAGTGCTCTATAATAAATGTCTGATCAAAATAAAAAAGGACAATGCCCTTTGGATGCATGATCAGATTCGAGACATGGGAAGGCAAATTGTTATAAATGAAAACCTTACTGATCTGAATAAACGTAGTCGATTGTGGAACCGTGATAAAATTATGTTTGTTTTGAAGGATAAAAAGGGAACGAGATTTATCCAAGGGATTGTTCTTAATTTCACAAAGCAAAGCAAGCCGGAGGTGAGACATCACCGTGGTGATGAAATTACCTGGGATAATTTTCGACAAAAGCCCAGTTATAATTCTGCATTAGCATGCATGAAAGAAAGGTACAAGAAATATTTGCAGGATCGAGAAGAGAAAGCAAGAATGTTGGTGTGTAAAAACTTAATGGTTTTAAACCTATCTGAAAGTTACAGTTTGAGAGCAATTCCTGATTTGACTGGGTATTCATCTCTAGAAAAGATTGATTTGGAGGGATGCATCACATTAAGTAAGATTCATGAATCTGTTGGGAGTTTGAGTTCATTAGTCAGGTTGAACATGCATCGATGCAAAAATCTTCTTAAATTACCCAGTGATGTCTCTGGACTGACGTACCTTGATAGTCTTATTCTTTCTGATTGCAGCAAATTGAAGGCATTGCCAAAGGACATAAGCCTCAAGGTCTCATTAAGGGAACTTCTTATTGATCGTACCGCTATAAGTGAGCTTCCTGAGTCCATTTTCCACCTCTCAAAACTGGAGAAGTTGAATGCTGACGGATGCCATTCCCTAAAGAGGCTTCCCACTTGCATTGGGAAACTATGCTGTTTGCGAAAACTGACTCTTCACGATACTGCATTAGAGACATTGCCTGATTCTATTGGCTTGATAGGGTGTTTATCACTCATTGAGGTTCCTGATTCTGTTGGGGAACTTGAATCATTGAAACAATTGCTTTTGAATCGAATTGGAATTCAAGAGCTGCCTGCTTCTATTGGTTCCTTGTCATATTTAAGTGAACTAAGTATTGGTAACTGCAAGCTGCTTGACAAATTGCCTGAATCAATAGAAGCATTAGCTTCTATTACCGAGCTTGACTTGGATGGAACATCAATTACTAGTTTGCCAGATAGCATTGGGGCCATGAAAATGCTAAGAAAGCTTAACATGAGAGAATGTCAGCATCTCAGATTTCTACCAGAGACAATTGGAAGTTGCTCAGCTCTTACAGAATTGGACATGTTGTTGGGAAAAACGGCGGTATGCGCAGAATCAAAATAA 2514 0.4093 MLSENNVISFVAGDFRLRWDVFLSFRGSDTRDSIIELLYEALQSRGIRIFRDDDGLCRGNEIAKSLVEAIDDSVASIVILSPNYAESHWCLEKLAKIWECRRLILPVFYNVDPSDVRKQTGPFAKDFKNHESSFQEETVSRWRKAMNIVGGIVGWVFPDARGEAELVRQLVKIILRELSKTPVAEFTVGLDDRVEELLKLLDMKSNEVKVLGLFGIVTSIVNNINDGIDTIRRIIKQNQVLVVLDDISDVNQLDSLIGKKEWLYNGSRVIITTRDKQVLPESYVKSNELYEVKELKLPEALELFSYHSLRRKEPAENFLNLSNQIVSLTGGLPLALEVFGSFLFDKRREEEWRDALEKLKQIRHGNLQGVLKISFDGLDEQEKCIFLDIACFFVGMEMKRDGVVDVLRGCGFKGEIAITVLYNKCLIKIKKDNALWMHDQIRDMGRQIVINENLTDLNKRSRLWNRDKIMFVLKDKKGTRFIQGIVLNFTKQSKPEVRHHRGDEITWDNFRQKPSYNSALACMKERYKKYLQDREEKARMLVCKNLMVLNLSESYSLRAIPDLTGYSSLEKIDLEGCITLSKIHESVGSLSSLVRLNMHRCKNLLKLPSDVSGLTYLDSLILSDCSKLKALPKDISLKVSLRELLIDRTAISELPESIFHLSKLEKLNADGCHSLKRLPTCIGKLCCLRKLTLHDTALETLPDSIGLIGCLSLIEVPDSVGELESLKQLLLNRIGIQELPASIGSLSYLSELSIGNCKLLDKLPESIEALASITELDLDGTSITSLPDSIGAMKMLRKLNMRECQHLRFLPETIGSCSALTELDMLLGKTAVCAESK 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2362 837 Pfam NB-ARC domain 228 365 IPR002182 GO:0043531
Bisa11g2362 837 SMART LRR_typ_2 639 661 IPR003591 -
Bisa11g2362 837 SMART LRR_typ_2 685 708 IPR003591 -
Bisa11g2362 837 SMART LRR_typ_2 770 793 IPR003591 -
Bisa11g2362 837 SMART LRR_typ_2 723 746 IPR003591 -
Bisa11g2362 837 Gene3D - 16 185 IPR035897 -
Bisa11g2362 837 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 180 - -
Bisa11g2362 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 389 IPR027417 -
Bisa11g2362 837 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Bisa11g2362 837 SMART till_3 18 152 IPR000157 GO:0007165
Bisa11g2362 837 SUPERFAMILY L domain-like 437 825 - -
Bisa11g2362 837 Gene3D - 217 287 IPR027417 -
Bisa11g2362 837 Gene3D Ribonuclease Inhibitor 713 826 IPR032675 -
Bisa11g2362 837 Gene3D Ribonuclease Inhibitor 532 637 IPR032675 -
Bisa11g2362 837 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 223 787 IPR044974 GO:0006952
Bisa11g2362 837 Gene3D Ribonuclease Inhibitor 638 712 IPR032675 -
Bisa11g2362 837 Gene3D - 295 385 IPR042197 -
Bisa11g2362 837 Pfam TIR domain 19 181 IPR000157 GO:0007165
Bisa11g2362 837 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Bisa11g2362 837 PRINTS Disease resistance protein signature 329 343 - -
Bisa11g2362 837 PRINTS Disease resistance protein signature 588 604 - -
Bisa11g2362 837 PRINTS Disease resistance protein signature 234 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2362 Bisa-ChrBisa11 47850039 47862907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2362 19 752 WRKY Transcription Factor Family AT4G12020 29.067 2.18e-71 254