Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2335 ATGTCTCGCACGTGCTCGCAGTGTGGCAACAACGGCCACAACTCCCGCACTTGCACCCATGGCGGCTGCGGCGATGCTTCCAGAGAGAACGGGATCATGCTGTTCGGCGTGCGACTCACTGAGGGGAACTCATTCAGGAAGAGTGCCAGTATGACGAATCTCTCGCAGTATGAGGTTCAGCATCAGGATTCCAACGCCGTCGACGCTGGTTACGCTTCCGACGACGTCGTCCACGCCTCCGGTCGCAGCCGCGAGCGCAAGAGAGGTGTTCCGTGGACGGAGGAAGAGCATAGGCTATTCCTCTTGGGGTTACAGAAGGTCGGGAAAGGAGATTGGAGGGGGATTTCCAAGAACTTTGTGAAAACTCGGACACCGACTCAAGTGGCGAGTCATGCTCAGAAGTACTTCCTCCGTCGCCACAACCGGAACCGGAGACGCCGGAGATCTAGCCTCTTTGACATTACCACCGATACGATGATGGATTCTTCTTTAATGGATGATGAGCAAGTTCACCAAGAAGCATCAATACCACCCACACATCCACAGTCGCATTACAGTGGCTTCGCCGGCTCAACTTTTCCGATAAACATAGTATCCGGAGCGAGATCAACGAAGCCGATCAGGCCAACCCCGGTCCTGCCAGTTCCTCCGTCTTCGAAAATGGCGACTCTAAATCTGAAAGAGAAGGTTCCTTTAGAACCCTTACCATTATCGCCGAAACTGCCGACGCCACCGACGCCGCAGTCAACTTCGAAGGAGTCGTCTCCGTCAAGCAGCCACTCGTCGCCGTCGGCTTTTCAGGCCATGTCCGGCAATTTTAGCGGCGGTGGAGATAGCATAATCAGCGTGGCTTGA 855 0.5497 MSRTCSQCGNNGHNSRTCTHGGCGDASRENGIMLFGVRLTEGNSFRKSASMTNLSQYEVQHQDSNAVDAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNRNRRRRRSSLFDITTDTMMDSSLMDDEQVHQEASIPPTHPQSHYSGFAGSTFPINIVSGARSTKPIRPTPVLPVPPSSKMATLNLKEKVPLEPLPLSPKLPTPPTPQSTSKESSPSSSHSSPSAFQAMSGNFSGGGDSIISVA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2335 284 SUPERFAMILY Homeodomain-like 86 139 IPR009057 -
Bisa11g2335 284 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Bisa11g2335 284 MobiDBLite consensus disorder prediction 1 22 - -
Bisa11g2335 284 SMART sant 88 138 IPR001005 -
Bisa11g2335 284 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Bisa11g2335 284 MobiDBLite consensus disorder prediction 247 284 - -
Bisa11g2335 284 MobiDBLite consensus disorder prediction 201 220 - -
Bisa11g2335 284 MobiDBLite consensus disorder prediction 233 284 - -
Bisa11g2335 284 PANTHER TRANSCRIPTION FACTOR KUA1 1 260 - -
Bisa11g2335 284 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g2335 284 CDD SANT 91 136 IPR001005 -
Bisa11g2335 284 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Bisa11g2335 284 Gene3D - 90 141 - -
Bisa11g2335 284 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Bisa11g2335 284 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Bisa11g2335 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Bisa11g2335 284 FunFam transcription factor MYB1R1 90 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2335 Bisa-ChrBisa11 47525809 47526862 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa11g2335 Myb_DNA-binding 3.7e-11 CL0123