LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g2331	ATGGAATCAAGGACGAGTGGGCCAAACCGCATTGCTTCTGCAACCACTCAAATTGAAGTTTTTTGCTATCTAAAAATTGAAGCAATGATTGATTTTGAGAATGAGAGAATGGAGAGGATGAAGAATTTTCTGCCATTTCTAGGAATGATGGTGGTGATTTTGATTCAGACGAGCAATCAAGTGGTAAGCAAAGCTGCTATGAGCGATGGGATGAACAAGTACGTCTTGATTTTCTACAGTTATGCCTTCACCTTCCTCCTCCTCCTTCCCTTCGCCTTCCTTCTGCTCAGATCTGAGTGTCCTCCTCTCAGCATCTCGTCCCTTTGTAGATTCTTCTTGCTTGCGATTTTTGGATGTTCAGCACAGATATTGACTTATGTTGGCATTGATTTGAGCTCACCTACTCTTGCCACTGCCCTCCTCAACCTCATTCCTGCTTTTGTTTACGTGCTTGCTCTCATTTTCAGGATGGAAGTAATACATTGTAGACAGCTTAGTAGCCAAGCCAAAGTCTTAGGGACTGCAATATCAATTGGTGGAGCATTTGTTGTGATTTTCTACAAGGGCCCTCCAATCTTCAAGGCACATTCTTCAGTTTCTTACAGTAAGCTTCCTTCCTCACCACAATCAAACTGGACATTGGGAGGCTTTTTTTGTGCCACTCAGGCATTCATTGTTTCACTTTGGTACATCTACCAGGTATCAGTCATCGAGGCATACCCTGTTATAATGGTGATAATATTCTTCCAAAAATCCTTTTGCACTATTCTGTCTGCACCATGTGCCTTAATTGCAGTTACAGATCCAAAGGCATGGGTTTTGAGGCTTGATATGGGGTTGGTTTCCATTTTATACCAAGCAGCGGTTTATAACTTGATTGGCTCCAGTCTAAATATGTGGTGCGTGCAGAAAGCTGGACCTTTGTTTTGTACAATGTTCAAGCCTGTGGGAATCATTTTCACTGTTCTCATGGGTGCACTTTTTCTGGGAGATGGTCTTCACCTTGGAAGTTTGGTTGGTTCAGTTATAATCATGGTGGGATTTTATGCTGTGATGTGGGGGAATGCCAAAGAACAGAAGAATGTTGAAGAAGGGATTGAGAATTTGGAGTCATCATGCCATAATGTTCCTCTGCTGCAAAACAGGACTTAA	1152	0.4236	MESRTSGPNRIASATTQIEVFCYLKIEAMIDFENERMERMKNFLPFLGMMVVILIQTSNQVVSKAAMSDGMNKYVLIFYSYAFTFLLLLPFAFLLLRSECPPLSISSLCRFFLLAIFGCSAQILTYVGIDLSSPTLATALLNLIPAFVYVLALIFRMEVIHCRQLSSQAKVLGTAISIGGAFVVIFYKGPPIFKAHSSVSYSKLPSSPQSNWTLGGFFCATQAFIVSLWYIYQVSVIEAYPVIMVIIFFQKSFCTILSAPCALIAVTDPKAWVLRLDMGLVSILYQAAVYNLIGSSLNMWCVQKAGPLFCTMFKPVGIIFTVLMGALFLGDGLHLGSLVGSVIIMVGFYAVMWGNAKEQKNVEEGIENLESSCHNVPLLQNRT	383

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g2331	383	Pfam	EamA-like transporter family	215	352	IPR000620	GO:0016020
	Bisa11g2331	383	Pfam	EamA-like transporter family	47	185	IPR000620	GO:0016020
	Bisa11g2331	383	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	81	188	-	-
	Bisa11g2331	383	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	255	357	-	-
	Bisa11g2331	383	PANTHER	WAT1-RELATED PROTEIN	44	363	IPR030184	GO:0016020\|GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g2331	Bisa-ChrBisa11	47457153	47469016	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g2331	41	359	Nodulin-like Gene Family	AT5G40240	40.184	1.13e-81	252