Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2328 ATGCCATTTGGGTTGGTCTCAGCTTGGAACAAGCGTCGAAGAAGCAAGTCTCAAGATCACACAGACCCCTGGGTATATAAACCTGTGGAGTTCTGGCAGCTTGAAGATCAAGCACCACAACCCACAAAAAGGAGGCATGGATCATCTGTATTCACCTTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGCGATGATAACCTGCTTGGAAAAGGAGGATTTGGCAAAGTCTACAGAGGCACTTTGCGTTCAGGGGAGGTTGTAGCAATCAAGAAAATGGAGCTGCCAGCATTCAAAGAAGCAGAGGGAGAGCGTGAGTTTCGAGTGGAAGTTGACATCTTGAGCAGACTTGACCATCCAAATCTTGTTTCTTTGATAGGCTATTGTGCTGATGGAAAGCACAGATTTCTAGTATACGAGTATATGCATAATGGGAACCTGCAAGATCATTTGAATGGCATTGGTGAAAGGAAAATGGACTGGCCTCTTAGACTGAAAGTGGCACTAGGAGCTGCAAAAGGGCTCGCTTACCTCCATACAAGTTCTGCTGTTGGAATTCCTATTGTTCATAGAGATTTTAAATCCACCAATGTTCTCTTAAATGCTAACTTTGAAGCAAAGATATCTGATTTTGGGCTAGCTAAGCTAATGCCAGAAGGGCAGGAGACTCACATGACAGCCAGGGTACTAGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACCGGTAAACTCACTCTACAAAGTGATGTTTACGCTTTTGGTGTTGTTCTTCTTGAGCTTTTGACTGGACGTCGAGCTGTAGATATAAACCAGGGTCAAAATGATCAAAACCTGGTCTTACAGGTGCGGCACATACTGAATGACCGTAAGAAGCTCCGTAAGGTGATAGATCCAGAGCTGGCTCGAAATTCTTACACCATTGAGTCTATAGCCATGTTTGCCAATCTGGCATCTCGATGTGTCCGTACTGACAGTAGTGAGAGACCTTCAATGGCAGAATGTGTAAGAGAACTCCAGCTGATTATCTATACAAATTCAAGAGGCTTGGGAATGGTTTTGCATAGTTTGAGGATGATCTAG 1086 0.4401 MPFGLVSAWNKRRRSKSQDHTDPWVYKPVEFWQLEDQAPQPTKRRHGSSVFTFKEMEEATCSFSDDNLLGKGGFGKVYRGTLRSGEVVAIKKMELPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPLRLKVALGAAKGLAYLHTSSAVGIPIVHRDFKSTNVLLNANFEAKISDFGLAKLMPEGQETHMTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDINQGQNDQNLVLQVRHILNDRKKLRKVIDPELARNSYTIESIAMFANLASRCVRTDSSERPSMAECVRELQLIIYTNSRGLGMVLHSLRMI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2328 361 FunFam receptor-like serine/threonine-protein kinase NCRK 142 352 - -
Bisa11g2328 361 CDD STKc_IRAK 69 343 - -
Bisa11g2328 361 Gene3D Transferase(Phosphotransferase) domain 1 142 350 - -
Bisa11g2328 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Bisa11g2328 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2328 361 Gene3D Phosphorylase Kinase; domain 1 32 141 - -
Bisa11g2328 361 SUPERFAMILY Protein kinase-like (PK-like) 45 343 IPR011009 -
Bisa11g2328 361 PANTHER OS01G0750732 PROTEIN 38 345 - -
Bisa11g2328 361 PIRSF ILK 32 351 - -
Bisa11g2328 361 ProSiteProfiles Protein kinase domain profile. 63 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2328 361 FunFam serine/threonine-protein kinase PBS1-like 32 141 - -
Bisa11g2328 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2328 Bisa-ChrBisa11 47420406 47423175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2328 46 340 Receptor kinase-like Gene Family AT3G58690 47.333 1.29e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Bisa11g2328 Pkinase 6.9e-50 CL0016