Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2310 ATGCCGGCGCACCGATCGAAATCGGAGAAGCACGATGCTGCGAAGCAGCTGCGGCGAGATCCCTATGAAGTTCTTGGAGTCTCCCGCAACTCCACAGATCAGGAAATCAAAACCGCTTACCGGAAAATGGCGCTCAAGTATCACCCTGACAAGAATGCCAATGATCCTAAAGCAGCAGATACGTTTAAAGAGGTCACCTTTTCGTATAACATCCTATCAGATCCTGACAAACGGCGTCAGTATGACTCGGCTGGTTTTGAGGCTGTTGAATCAGATAGCCAAGAATTGGAGTTGGACCTTTCAAGTTTAGGTGCCGTGAATACAATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACCGTATCAGCAACTGTCTTGGAAGAGGCACTTAATGGTGTGGTGACAATTCGCCCACTTCCACTAGGACATCCTGTATCTAGAAGGGTTGAGAAGCAATGTGCTCACTTTTATTCAGTTACAATAACAGAAGAGGAAGCACGTGCTGGTTTTGTTTGTCGGGTGCAATCATCTGACAAAAGTAAGTTCAAGTTGTTATACTTTGATCAAGAAGAGAATGGTGGATTGAGTCTGGCACTCCAGGAAGACAGTGCAAAAACAGGAAAGGTTACCTCTGCTGGGATGTATTTTCTTGGTTTTCCTGTTTATCGGCTGGATCAAACAGCGAATTCAATAGCAGCGGCTAAGGATCCAGATACATCATTTTTCAGAAAGCTGGATGGGTTTCAACCATGTGAATTAACAGAATTGAAGGCTGGTACACACATCTTTGCTGTTTATGGTGACAATTTCTTTAAAAGTGCAAGCTATGCAATAGAAGCTCTATGTGCTGCACCTTTTGGTCAAGAAAAAGAGAGCCTCAGGAGTATAGAAGCTCAAATTTTATCTAAAAGGGCAGAGCTATCAAAATTTGAGAGTGAATACAGAGAGGTTCTGGCACAATTTACGGAGATGACGAACAGATATGCACAAGAAATGCAAGCGATTGATGAGCTACTGAAGCAAAGAAATGACATACATGCATCATACACAATTGTTCCATTAAAACGTAGTACAAGTAAGAGCAGGAGTAAAAGTTCTTCCAAGGAGACCACAGAAGATGGCCAAGCTAGAGAGAAGAGATATACAAGAGATCGATCAAAGAAGAAGAGATGGTATAATATCCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA 1227 0.423 MPAHRSKSEKHDAAKQLRRDPYEVLGVSRNSTDQEIKTAYRKMALKYHPDKNANDPKAADTFKEVTFSYNILSDPDKRRQYDSAGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGVVTIRPLPLGHPVSRRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTANSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHIFAVYGDNFFKSASYAIEALCAAPFGQEKESLRSIEAQILSKRAELSKFESEYREVLAQFTEMTNRYAQEMQAIDELLKQRNDIHASYTIVPLKRSTSKSRSKSSSKETTEDGQAREKRYTRDRSKKKRWYNIHLRVDKRKAC 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2310 408 Gene3D DnaJ domain 4 103 IPR036869 -
Bisa11g2310 408 PRINTS DnaJ domain signature 77 96 IPR001623 -
Bisa11g2310 408 PRINTS DnaJ domain signature 57 77 IPR001623 -
Bisa11g2310 408 PRINTS DnaJ domain signature 40 55 IPR001623 -
Bisa11g2310 408 PRINTS DnaJ domain signature 22 40 IPR001623 -
Bisa11g2310 408 SMART dnaj_3 19 77 IPR001623 -
Bisa11g2310 408 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 407 - -
Bisa11g2310 408 Pfam DnaJ domain 20 82 IPR001623 -
Bisa11g2310 408 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Bisa11g2310 408 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Bisa11g2310 408 FunFam Chaperone protein dnaJ 16 4 102 - -
Bisa11g2310 408 MobiDBLite consensus disorder prediction 1 19 - -
Bisa11g2310 408 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g2310 408 CDD DnaJ 20 74 IPR001623 -
Bisa11g2310 408 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Bisa11g2310 408 Coils Coil 297 317 - -
Bisa11g2310 408 MobiDBLite consensus disorder prediction 366 385 - -
Bisa11g2310 408 MobiDBLite consensus disorder prediction 360 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2310 Bisa-ChrBisa11 47263874 47268221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2310 18 83 C2H2 Transcription Factor Family AT1G74250 42.254 8.18e-11 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2310 11 47263874 47268221 Bisa11g2310 11 47263874 47268221 ECH