Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2295 ATGATGGCAATTTATGTTAATGCTTATCCACAATGCCAGCTCGGAAGTAGTGGTGAGTCTCTGGAGCGTCTGGCTGCCGAAGCTTGTATATTTCTTAGCTGGAGAGAAGAAGGATATCAAAGGAAAGGTTACCATCTACCTGTCATGGCATCCAGATCATATGCTAATCTCCTAGACATAGCTGGTGGATACTTGTTGGATCTTCCTCAGACCCCAAGAACTATTCCAAGAGTTAAGACAGTTCCTGGAATTATTGGTGACCTGGATGGTAATGGTAATAATGATGCAGCTTCAGATGTTAGCTCTTCTGATTGTCGGGAGAGGAAAATTTTAGTGGCAAACATGCTGCCATTGCAGGCTAAAAGAGATGCAGAAACTGCTAAATGGTGTTTCAGTTTGGATGAGGATTCAATTTTATTACAATTGAAAGCTGGTTTTCCATCTGATACTGAGGTTATCTATGTAGGTTCCCTAAAGGTTGAAATAGATGCCAGTGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGACTTCAATTGTGTGCCTACCTTTCTACCTCATGAACTCCAGAGAAGGTTTTATCTTGGTTTTTGTAAGCAGCAGCTGTGGCCACTCTTTCATTACATGCTACCTGTGTGCCCAGCTCACGGTGACCGCTTTGACCGCTTGCTTTGGCAAGCTTATGTTTCTGCGAACAAAATATTTGCGGACAAGGTTATGGAAATAATTAATCCTGAAGATGATTTTGTTTGGGTTCATGATTATCATTTGATGGTTTTGCCTACATTTCTGAGGAAGCGATATAATCGAGTCAAACTTGGCTTCTTCCTTCACAGTCCATTCCCTTCATCTGAAATTTACCGAACTCTGCCAGTGCGAGATGAAATTCTGAGGGGATTGTTGAACTCCGACCTAATTGGTTTCCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGCAGAATGCTGGGCCTGGACTATGAATCTAAGAGGGGACATATAGGACTTGATTACTTTGGCCGCACTGTATATATCAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTGGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAACTAAAAGAGATTCAGGAAGAGTTTAAGGGTAGGAAGGTCATTCTTGGTGTTGACGACATGGATATCTTTAAGGGCATCAGCTTGAAACTTCTAGCTGTGGAGCAGCTGCTGCAGCTGAAACCAGATTTGCAGGGGAAAATTGTCCTTGTTCAAATTGTAAATCCTGCAAGGGGTTTAGGAAAGGATGTTCAGGAAGCAAAGAAGGAAACATACTTAATTGCCAAGAGGATCAATGATACATATGGCTCAGAACACTATATGCCAGTTATTCTCATTGACCGTCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTGGCAGAGTGCTGCATTGTCAATGCTGTTAGGGATGGTATGAACTTAGTCCCATACAAATATGTTGTCTGCAGACAAGGAACTTCTCAATTGGACAAAGCACTGGGTCGAAAAAGCAATTCTCCTCGCACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAACCCGTGGGATATTGATGCCGTTGCTGATGCTCTGAATCTGGCCATTACAATGCGTGATTCAGAGAAGCAATTGAGGCATGAGAAACACTATCGTTATGTCAGTTCTCATGATGTAGCTTATTGGGCATGCAGCTTTATGCAGGATTTGGAGAGAGCATGCATAGATCATTGCACCAAAAGGTGTTGGGAAATTGGTTTGGGCCTAGGTTTCAGAGTTGTTTCTCTGTCTCCTGGTTTCAGGAAGTTGTCTATTGACCATATTGTCTCAGCGTATAGAAGAACCAGTAGAAGGGCCATATTTCTTGATTATGATGGTACAGTTATACCACAGTCTGATATAAATAAAGCTCCTAAATCTAACATCATATCCGTTCTAAATACTCTGTGTGATGATGCCAAGAATACCGTGTTCATTGTTAGTGGGAGGGGAAGAGATTCTTTGAGTGAGTGGTTTACTTCATGCAAAATGCTGGGGCTTGCAGCTGAACATGGGTACTATTTAAGGTGGAATAGAGACTTGGAATGGGAAACCAGTCACTTGTCTGCTGACCTTGATTGGAAAAATATTGTGGAACCTATCATGACTGTGTATACAGAGACAACTGATGGATCTAATATTGAAATTAAGGATAGTGCTCTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGCTCTTGCCAAGCCAAAGAATTGTTGGATCACTTGGAAAGTGTGATTGCTAATGAACCAGCTGTTGTTAAGAGGGGTCAACACATTGTCGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTGACTGCTGAAAAGGTTCTTTCGACCTTGGCAAATGGCGGAAATCCTCCAGATTTTGTTATGTGCATTGGAGACGATAGGTCAGATGAAGACATGTTTGAGAGCATATTAAGGACAGCCTCTTGTCCTTCATTGCCAGTGGCTCCAGAGATCTTTGCTTGCACGGTTGGTAGGAAGCCAAGCAAGGCCAAGTATTTTCTTGATGATACCACTGATGTTGAAAGATTGCTTGCGACCCTTTCTACTGCTACAACACCAAATCCACAACTACAACCAGAGCATCTTCCCCAATTCCAGGTTTCTTTTGAAACCGCAGATTGA 2742 0.4252 MMAIYVNAYPQCQLGSSGESLERLAAEACIFLSWREEGYQRKGYHLPVMASRSYANLLDIAGGYLLDLPQTPRTIPRVKTVPGIIGDLDGNGNNDAASDVSSSDCRERKILVANMLPLQAKRDAETAKWCFSLDEDSILLQLKAGFPSDTEVIYVGSLKVEIDASEQEEVAQKLLEDFNCVPTFLPHELQRRFYLGFCKQQLWPLFHYMLPVCPAHGDRFDRLLWQAYVSANKIFADKVMEIINPEDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKLKEIQEEFKGRKVILGVDDMDIFKGISLKLLAVEQLLQLKPDLQGKIVLVQIVNPARGLGKDVQEAKKETYLIAKRINDTYGSEHYMPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTSQLDKALGRKSNSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLAITMRDSEKQLRHEKHYRYVSSHDVAYWACSFMQDLERACIDHCTKRCWEIGLGLGFRVVSLSPGFRKLSIDHIVSAYRRTSRRAIFLDYDGTVIPQSDINKAPKSNIISVLNTLCDDAKNTVFIVSGRGRDSLSEWFTSCKMLGLAAEHGYYLRWNRDLEWETSHLSADLDWKNIVEPIMTVYTETTDGSNIEIKDSALVWHHQDADPDFGSCQAKELLDHLESVIANEPAVVKRGQHIVEVKPQGISKGLTAEKVLSTLANGGNPPDFVMCIGDDRSDEDMFESILRTASCPSLPVAPEIFACTVGRKPSKAKYFLDDTTDVERLLATLSTATTPNPQLQPEHLPQFQVSFETAD 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2295 913 CDD GT20_TPS 108 593 IPR001830 GO:0003824|GO:0005992
Bisa11g2295 913 Gene3D Glycogen Phosphorylase B; 101 360 - -
Bisa11g2295 913 NCBIfam trehalose-phosphatase 638 887 IPR003337 GO:0003824|GO:0005992
Bisa11g2295 913 SUPERFAMILY HAD-like 640 887 IPR036412 -
Bisa11g2295 913 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 101 360 - -
Bisa11g2295 913 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 769 900 - -
Bisa11g2295 913 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 639 756 - -
Bisa11g2295 913 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 77 888 IPR001830 GO:0003824|GO:0005992
Bisa11g2295 913 Pfam Trehalose-phosphatase 643 877 IPR003337 GO:0003824|GO:0005992
Bisa11g2295 913 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 596 - -
Bisa11g2295 913 CDD HAD_TPP 641 882 - -
Bisa11g2295 913 FunFam Alpha,alpha-trehalose-phosphate synthase 362 577 - -
Bisa11g2295 913 NCBIfam HAD-IIB family hydrolase 641 842 IPR006379 -
Bisa11g2295 913 Pfam Glycosyltransferase family 20 108 593 IPR001830 GO:0003824|GO:0005992
Bisa11g2295 913 Gene3D Glycogen Phosphorylase B; 361 577 - -
Bisa11g2295 913 Gene3D - 769 899 IPR023214 -
Bisa11g2295 913 Gene3D - 639 757 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2295 Bisa-ChrBisa11 46999800 47008866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2295 49 911 Trehalose Biosynthesis Gene Families AT1G23870 73.441 0.0 1351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2295 11 46999800 47008866 Bisa11g2295 11 46999800 47008866 ECH