LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g2293	ATGGGAGAGGATAAGATTGAAGAGAGCAGTGTGAGATTGTTATCTAGTTGCAGCAGTGGTGGAAGCAGTGGGTCAAGGTGGGTTGACGGGACCGAAGTGGAGCGGGAGGTACCTCCATGCACGAAGGAAAATGAGAAGGAGGGATTTGGATCAATCAGAAGGCGACTAGTGAAGAAGCCCAGGAGAGTTGATTCATTTGATGTAGAGGCCATGGAGGTTTCTGGTAGCCACGTGCACCAATCCAAGGATCCTTCCCTTTGGCCCACTCTTGCCTTAGCATTTCAGACTCTCGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTCTATGTTTTCACTGATGTCTTCAGCAAGGTTCCAATTGAATCAGATATCGATATCTTGGGGGCATTATCATTAGTAATGTACACAATAACAATTATACCGTTAGCAAAGTATGTTTTTATAGTTCTCAAGGCAAATGATAATGGAGAAGGAGGAACATTTGCACTTTACTCGCTAATTTGCAGGTATGCAAATGTGAATCTGCTTCCAAATCGTCAGCAAGCCGATGAACAGATTTCTAGCTTTAGGCTAAAACTACCCACTCCAGAGCTGGAAAGGGCTTTGACCATAAAGGAGATTTTGGAAAGGAAGTCATATGTGAAAACCTTTCTGTTGCTGTTGGTTCTGATGGGAACTTCCATGATTATTGGAGATGGTATTCTAACACCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTTCAAGGTCAAATTCAAGGATTTGATACAAGGGAGGTGGTTATTGTTTCAATTGTAGTCCTGGTGGCTTTGTTCAGCATACAACAGTTCGGTACCAGTAAAGTGGGTTTCATGTTTGCCCCTGCACTTGCTTTATGGTTCTCTTCTCTGGCTTTTATTGGGATATACAATGTACTTAACCACGACATCACTGTCCTGAAAGCAATCAATCCAGGTTATATCTATTATTTCTTCAAGAAGAACAAGAAAAATGCATGGTCATCCCTTGGCGGCTGTGTTCTGTGTATTACAGGTGCTGAAGCAATGTTTGCTGATCTGGGTCACTTTTCTGTATCATCAATACAGATTGCCTTTTCTTTTGTGGTATTTCCCTGTCTCCTCCTCGCTTATATGGGCCAAGCTGCTTATCTGATAAAGTACCCCTATGCTCATCCAAGAATATTCTATGCATCTGTTCCAGAGAGTCTTTTCTGGCCAGTGTTTGTGATAGCCACAGTTGCTGCTATGATTGCCAGCCAAGCTATGATATCTGCTACGTTTTCTTGTGTAAAGCAATCTATGGCTTTGGGCTGCTTTCCAAGGCTCAAGATTATTCACACCTCAAAAAAATTTATGGGTCAAATTTACATCCCCGTGATCAACTACTTTCTGTTGATCATGTGCATTGCTGTTGTTTCCATCTTCCAGAGCACTACTAGTATTGCAAATGCATATGGCATTGCAGAAGTAGGTGTGATGATGGTTAGCACCACCTTGGTGAGTCTTGTAATGCTTCTGATCTGGCAGACCAACTTGTTCTTGGTATTTTGCTTCCTGCTTGTATTCGGATCGGTTGAGCTCATTTACATGTCTTCTGTCCTATCAAAAATCACAGAGGGTGGCTGGCTTCCCCTTGCCTTCGCTTCCCTTTTCCTTTCTGTGATGTACACGTGGAACTATGGGAGTGTACTCAAGTACCAAAGTGAAGTCAGGGAGAAGATCTCCATGGACTTCATGTTCGATCTCGGCTCCAATCTTGGAACTGTAAGGGTCCCAGGAATAGGATTGCTATACAATGAGCTTGTCCAAGGCATTCCCTCCATTTTTGCACAGTTCCTCTTAAGCCTCCCAGCTGTGCACTCCACTGTAATCTTTGTCTGCATCAAATATGTTCCAGTCCCAGTGGTTCCTCAAGAGGAGAGATTCCTGTTTCGAAGAGTTTGCTCCAAAGATTACCATATGTTTCGCTGTGTTGCCAGGTACGGTTATAAGGATGTTAGGAAGGAAGATCACCGTGCATTTGAGCAACTTCTCATTGAAAGCCTTGAGAAGTTCTTGAGGAAGGAGGCTAAGGAAAACTTCATAGATAGTGTCTCGAGCAGGTACTGCAAACATGAGAGTGCCTCACACCGATATCATTCAAGCAAGGATGACATACATGGTCTGACTGATGATGTTGTTTCTGTTGAATTCTAA	2199	0.4329	MGEDKIEESSVRLLSSCSSGGSSGSRWVDGTEVEREVPPCTKENEKEGFGSIRRRLVKKPRRVDSFDVEAMEVSGSHVHQSKDPSLWPTLALAFQTLGVVYGDMGTSPLYVFTDVFSKVPIESDIDILGALSLVMYTITIIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEQISSFRLKLPTPELERALTIKEILERKSYVKTFLLLLVLMGTSMIIGDGILTPAISVMSAISGLQGQIQGFDTREVVIVSIVVLVALFSIQQFGTSKVGFMFAPALALWFSSLAFIGIYNVLNHDITVLKAINPGYIYYFFKKNKKNAWSSLGGCVLCITGAEAMFADLGHFSVSSIQIAFSFVVFPCLLLAYMGQAAYLIKYPYAHPRIFYASVPESLFWPVFVIATVAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKKFMGQIYIPVINYFLLIMCIAVVSIFQSTTSIANAYGIAEVGVMMVSTTLVSLVMLLIWQTNLFLVFCFLLVFGSVELIYMSSVLSKITEGGWLPLAFASLFLSVMYTWNYGSVLKYQSEVREKISMDFMFDLGSNLGTVRVPGIGLLYNELVQGIPSIFAQFLLSLPAVHSTVIFVCIKYVPVPVVPQEERFLFRRVCSKDYHMFRCVARYGYKDVRKEDHRAFEQLLIESLEKFLRKEAKENFIDSVSSRYCKHESASHRYHSSKDDIHGLTDDVVSVEF	732

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g2293	732	MobiDBLite	consensus disorder prediction	29	47	-	-
	Bisa11g2293	732	Pfam	K+ potassium transporter	93	666	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa11g2293	732	MobiDBLite	consensus disorder prediction	1	47	-	-
	Bisa11g2293	732	NCBIfam	potassium uptake protein	92	707	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa11g2293	732	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	81	701	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa11g2293	732	MobiDBLite	consensus disorder prediction	11	26	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g2293	Bisa-ChrBisa11	46962953	46968134	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g2293	4	698	Inorganic Solute Cotransporters	AT1G60160	77.443	0.0	1100